RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 P01658 132 aa6.28□□□□□ -1.4
Scn8a-204ENSMUST00000108909 Cd27P41272 250 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 BC048502Q80Y74 154 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Fgf6P21658 208 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Igkv6-15A0A140T8M5 115 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Cox6b1P56391 86 aaKnown RBP6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Crip1P63254 77 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Tmem213Q08EA8 116 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm20499D3Z4G5 72 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Igf1P05017 153 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm9949Q8C9F4 104 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav4d-3A0A075B625 110 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ighv1-74A0A0G2JGK2 117 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Spink4O35679 86 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Cela2aP05208 271 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 CrygcQ61597 174 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Prh1P05142 261 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ndufb4Q9CQC7 129 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ndufs7Q9DC70 224 aa6.27□□□□□ -1.41
Scn8a-204ENSMUST00000108909 9930022D16RikQ8BG27 128 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Igkv1-35A0A0G2JDE5 120 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm14137Q8CE97 175 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Znf672Q99LH4 468 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Igkv1-122A0A140T8M9 119 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Wdr38Q9D994 303 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Tpsg1Q9QUL7 311 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav13d-1A0A075B606 110 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 3110082J24RikF6Z6Z2 108 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P04940 107 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P04941 107 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ucn2Q99ML8 113 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 A730015C16RikQ8C992 119 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ighv1-50A0A075B5W1 117 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 LoxP28301 411 aa6.26□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P04942 107 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Vpreb2P13373 142 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 H2al1aQ5M8Q2 105 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 H2al1eQ810S6 105 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 CtrlQ9ER05 264 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ighv5-9-1A0A0A6YVS4 126 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ifitm1Q9D103 106 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Snai3Q9QY31 287 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav13n-1A0A0G2JEU8 110 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Cfap126Q6P8X9 189 aa6.25□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Utp20Q5XG71 2788 aaKnown RBP6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav4-3A0A0B4J1K1 110 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Cmc4Q61908 68 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Mlst8Q9DCJ1 326 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P01649 108 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P01725 110 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Nsd1O88491 2588 aaKnown RBP6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ube2e1P52482 193 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Igkv2-109A0A075B5K6 120 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Klk12B2RVZ0 247 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm5468Q8C3D3 155 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Col6a5A6H584 2640 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ighv8-12A0A0G2JDE1 119 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm20708H3BKF4 155 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Col5a1O88207 1838 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ighv2-6A0A075B6A7 116 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 CrygdP04342 174 aa6.24□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm10542F6XDR3 90 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Wfdc15bQ9JHY4 80 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Sp5Q9JHX2 398 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Timm17aQ9Z0V8 171 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ighv1-4A0A075B5T4 117 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Nop10Q9CQS2 64 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 IgipA0A1B0GR74 53 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P01786 117 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm10192Q3V0S1 108 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ntf4Q80VU4 209 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 P01630 113 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav9-2A0A075B647 113 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav9-4A0A0B4J1K2 113 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav13d-4A0A0G2JFX3 110 aa6.23□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Reg3gO09049 174 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Vpreb1P13372 142 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Tmem254aP0DN89 123 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Tmem254bP0DN90 123 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Tmem254cP0DN91 123 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Fancd2osQ9D4K4 178 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm20481G3UXK4 153 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Mapk1ip1lQ8BH93 242 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Egr2P08152 470 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Col8a2P25318 699 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 9530053A07RikE9PVG8 2581 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav9d-3A0A075B695 113 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Gm17472A0A075B683 117 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Ormdl1Q921I0 153 aa6.22□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Fam19a4Q7TPG5 135 aa6.21□□□□□ -1.41
Scn8a-204ENSMUST00000108909 H2al1bA0A087WP11 105 aa6.21□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Trav9n-2A0A0G2JDP3 113 aa6.21□□□□□ -1.41
Scn8a-204ENSMUST00000108909 Sh2d1aO88890 126 aa6.21□□□□□ -1.42
Scn8a-204ENSMUST00000108909 Trav13n-2A0A0G2JF93 110 aa6.21□□□□□ -1.42
Scn8a-204ENSMUST00000108909 1500011B03RikQ3TTH7 73 aa6.21□□□□□ -1.42
Scn8a-204ENSMUST00000108909 Ighv3-4A0A0A6YXF1 117 aa6.21□□□□□ -1.42
Scn8a-204ENSMUST00000108909 Psmb8P28063 276 aa6.21□□□□□ -1.42
Scn8a-204ENSMUST00000108909 Trav13-2A0A075B649 110 aa6.2□□□□□ -1.42
Scn8a-204ENSMUST00000108909 Trav13-4-dv7A0A075B6C2 110 aa6.2□□□□□ -1.42
Scn8a-204ENSMUST00000108909 Ighv8-5A0A0A6YY60 119 aa6.2□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms