RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Trav9-4A0A0B4J1K2 113 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Gphb5Q812B2 130 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Tm2d1Q99MB3 208 aa5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 MifP34884 115 aaKnown RBP5.34□□□□□ -1.55
Scn3a-202ENSMUST00000100069 Nxph4G3X9N5 304 aa5.34□□□□□ -1.56
Scn3a-202ENSMUST00000100069 P01791 123 aa5.34□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm6040Q4QY32 63 aa5.34□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Igkv8-21A0A140T8P7 120 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Tfpi2O35536 230 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Defb47Q30KN1 79 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Klk9Q32M27 251 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ifitm6A0A1B0GS75 124 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm3618D3Z4P5 127 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 NpyP57774 97 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Wfdc9Q3UW41 83 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ntf4Q80VU4 209 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Csdc2Q91YQ3 154 aa5.33□□□□□ -1.56
Scn3a-202ENSMUST00000100069 TroQ6DIC6 2087 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm7257D3YX25 99 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm26602M0QWA4 95 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 P04944 107 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ang3P97802 145 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Rnf144bQ8BKD6 301 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv1-61P01749 117 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Cfap126Q6P8X9 189 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 DscamQ9ERC8 2013 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv12-3A0A075B5T1 117 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm5878E9PUB3 99 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Iglc1A0A0G2JE99 106 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 P01843 105 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Cd24P24807 76 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 BaalcQ8VHV1 145 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 4933414I15RikQ9D4D5 133 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Wnk1P83741 2377 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv2-6A0A075B6A7 116 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Nsun4C4P6S0 806 aaKnown RBP5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Reg3bP35230 175 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Cox7a1P56392 80 aa5.32□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm10401E9Q3K6 71 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Mrpl35Q9CQL6 188 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Jmjd1cQ69ZK6 2350 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm17472A0A075B683 117 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Notch4P31695 1964 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Trav9n-2A0A0G2JDP3 113 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ncor1Q60974 2453 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm19935A0A1B0GSF9 52 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm17677B3GLJ5 116 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 CrygdP04342 174 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Sdk1Q3UH53 2193 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Fhl3Q9R059 289 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv1-5A0A0A6YWG2 117 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 4930470P17RikQ9D542 155 aa5.31□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv1-75A0A075B5Y2 117 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Znf706Q9D115 76 aaKnown RBP5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Rnase1P00683 149 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 1700074P13RikQ9D9G7 251 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Tns1E9Q0S6 1888 aaKnown RBP5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Tet2Q4JK59 1912 aaKnown RBP5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Pcsk5Q04592 1877 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Igkv3-3A0A140T8Q0 119 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ebi3O35228 228 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 P01643 108 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv10-1A0A0B4J1J6 119 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Atox1O08997 68 aaKnown RBP5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Edn2P22389 175 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 A230072I06RikQ3UUJ8 172 aa5.3□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Spink4O35679 86 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm5468Q8C3D3 155 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Trav9n-4A0A075B631 113 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 FshbQ60687 130 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Prok2Q9QXU7 128 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Igkv1-88A0A140T8N1 120 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 9430015G10RikA2ASP7 199 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Mlst8Q9DCJ1 326 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Trav7-6A0A075B640 112 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 C920008G01RikA0A0B4J1N1 112 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Prr15lQ8JZM2 100 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Iglv1A0A075B663 117 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Cox8cA6H666 72 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 9230109A22RikQ8BHE6 111 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Cdpf1Q8R3A2 119 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Pcnx2Q5DU28 2122 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 NpwA0A1L1STR8 176 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Timm17bQ9Z0V7 172 aa5.29□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Col4a6B1AVK5 1691 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Tcl1b5P56845 121 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Cfc1P97766 202 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 NpbQ8K4P1 119 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 LitafQ9JLJ0 161 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Spry2Q9QXV8 315 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Wdr90Q6ZPG2 1874 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Rif1Q6PR54 2419 aaKnown RBP5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Gm10638F6QEG2 257 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Znf672Q99LH4 468 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Trav14-1A0A0G2JF94 121 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ndufa4l2Q4FZG9 87 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 AcanQ61282 2132 aaKnown RBP5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Rpl39lQ9CQD0 51 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Snai3Q9QY31 287 aa5.28□□□□□ -1.56
Scn3a-202ENSMUST00000100069 Ighv2-7A0A075B5Q8 116 aa5.28□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 94.6 ms