RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gm2916Q9D9B9 127 aa11.24□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Sprr3O09116 238 aa11.24□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 MifP34884 115 aaKnown RBP11.24□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Ly6gP35461 111 aa11.24□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Col24a1Q30D77 1733 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Ormdl1Q921I0 153 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Trav13n-1A0A0G2JEU8 110 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Trav13d-4A0A0G2JFX3 110 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gm10735Q3US96 136 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 P06328 117 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Tmem213Q08EA8 116 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Arhgap21Q6DFV3 1944 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Spink10Q8CAC8 162 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Parp4E9PYK3 1969 aa11.23□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Fgf6P21658 208 aa11.22□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Spink8Q09TK9 105 aa11.22□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Pla2g2dQ9WVF6 144 aa11.22□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gm17472A0A075B683 117 aa11.21□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 P01728 117 aa11.21□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 P01820 115 aa11.21□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Trav7-6A0A075B640 112 aa11.21□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gm42674D3YUT9 64 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tmem254aP0DN89 123 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tmem254bP0DN90 123 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tmem254cP0DN91 123 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Gvin1Q80SU7 2427 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Ighv1-82A0A0G2JEU7 117 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Lmo4P61969 165 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 1700012A03RikQ9DAF1 130 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Heatr5aQ5PRF0 2038 aa11.21□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Nup210Q9QY81 1886 aaKnown RBP11.2□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 P84751 237 aa11.2□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tcl1b3P56842 122 aa11.2□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Gm17359A0A0G2JEB7 487 aa11.2□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Cdpf1Q8R3A2 119 aa11.2□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tax1bp3Q9DBG9 124 aa11.2□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 4930470P17RikQ9D542 155 aa11.19□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Gm37389A0A0A6YW05 95 aa11.19□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 BikO70337 150 aa11.19□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Igkv3-5A0A140T8M6 119 aa11.19□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Usf3B2RUQ2 2221 aa11.19□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Trav13-2A0A075B649 110 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Gm17577J3QNF7 156 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Ighv1-61P01749 117 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Trav13d-1A0A075B606 110 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Gm20726G3UX18 150 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Abca4O35600 2310 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tcte2E9PY37 120 aa11.18□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Reg3bP35230 175 aa11.17□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Fam222aQ6PGH4 453 aa11.17□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Q9D131 166 aa11.17□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Ube2aQ9Z255 152 aa11.17□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Prh1P05142 261 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Ndufc1Q9CQY9 76 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Sdk2Q6V4S5 2176 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Ighv1-85A0A075B5Y6 117 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Cryba4Q9JJV0 196 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tnfrsf23Q9ER63 176 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Igkv1-88A0A140T8N1 120 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Fgfbp3Q1HCM0 245 aa11.16□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Rp1l1Q8CGM2 1859 aa11.15□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Trav9n-4A0A075B631 113 aa11.15□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 P01659 112 aa11.15□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Higd2aQ9CQJ1 106 aa11.15□□□□□ -0.62
Pcdh20-201ENSMUST00000061628 Tcf20Q9EPQ8 1987 aa11.15□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Gm10542F6XDR3 90 aa11.14□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Ebi3O35228 228 aa11.14□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Trav13-4-dv7A0A075B6C2 110 aa11.13□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Znf239P24399 201 aa11.13□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Rpl18aP62717 176 aaKnown RBP11.13□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Klk5Q9D140 293 aa11.13□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Igkv2-109A0A075B5K6 120 aa11.13□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Klk12B2RVZ0 247 aa11.12□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Ncoa6Q9JL19 2067 aa11.12□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Trav13-1A0A075B644 110 aa11.12□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 E130116L18RikQ8BMV6 101 aa11.12□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Naa38Q9D2U5 125 aa11.12□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Triap1Q9D8Z2 76 aa11.12□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 SonQ9QX47 2444 aaKnown RBP11.11□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Ighv2-3A0A075B696 115 aa11.11□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Trav13n-2A0A0G2JF93 110 aa11.11□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Timm17bQ9Z0V7 172 aa11.11□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 CrygdP04342 174 aa11.11□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Vpreb2P13373 142 aa11.11□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Ep300B2RWS6 2412 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Gm5629P06327 117 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 A130051J06RikQ8CAU1 227 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 CtrlQ9ER05 264 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Gm3618D3Z4P5 127 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Arhgef17Q80U35 2057 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Vpreb3D3Z6J4 130 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Igkv3-10A0A0G2JGN0 119 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Gm44965A0A0N4SVR3 59 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Gm10401E9Q3K6 71 aa11.1□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Ighv2-6-8A0A0A6YWY9 116 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 B230359F08RikA0A0B4J1K3 109 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Gm10226O88253 85 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Col8a2P25318 699 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 PpdpfQ9CR37 115 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Igkv1-35A0A0G2JDE5 120 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms