RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Erdr1J3QMM0 206 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Klk1b4P00757 256 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Cfc1P97766 202 aa11.41□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Gm815Q3UWS2 115 aa11.4□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Tcte2E9PY37 120 aa11.4□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Unc79Q0KK59 2596 aa11.4□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ighv1-82A0A0G2JEU7 117 aa11.4□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ndufb4Q9CQC7 129 aa11.4□□□□□ -0.58
Scaf4-201ENSMUST00000039280 Ighv8-12A0A0G2JDE1 119 aa11.39□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Fhl1P97447 280 aaKnown RBP11.39□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Ash1lQ99MY8 2958 aa11.39□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Smim20D3Z7Q2 69 aa11.39□□□□□ -0.59
Scaf4-201ENSMUST00000039280 P01753 117 aa11.39□□□□□ -0.59
Scaf4-201ENSMUST00000039280 A130051J06RikQ8CAU1 227 aa11.39□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Notch2O35516 2470 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Gm20499D3Z4G5 72 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Spata25Q9DA57 226 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Defa25Q5G864 92 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Rbmy1bQ60990 380 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 1810032O08RikE9PZV8 113 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Rpl39P62892 51 aa11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Srsf2Q62093 221 aaKnown RBP11.38□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Nbeal1E9PYP2 2688 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Cops9Q3U898 57 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 SpinklQ8CEK3 90 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Triap1Q9D8Z2 76 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 ColqO35348 457 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Morn3Q8C5T4 241 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 P01738 130 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Smim1P0C8K7 78 aa11.37□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Rpl36aP83882 106 aaKnown RBP11.36□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Hoxd3P09027 433 aa11.36□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Klk5Q9D140 293 aa11.36□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Egr2P08152 470 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Lgals4Q8K419 326 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Tmem263Q9DAM7 115 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Wdfy3Q6VNB8 3508 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 1700056E22RikF7CNM6 234 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Fam222aQ6PGH4 453 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Spink12Q9D256 87 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Ighv12-3A0A075B5T1 117 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Gm10226O88253 85 aa11.35□□□□□ -0.59
Scaf4-201ENSMUST00000039280 P01747 120 aa11.34□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Smlr1J3QMJ4 66 aa11.34□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Dnal4Q9DCM4 105 aa11.34□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Trav9n-2A0A0G2JDP3 113 aa11.34□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Spink13Q3UTS8 97 aa11.34□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Q9DAQ5 155 aa11.34□□□□□ -0.59
Scaf4-201ENSMUST00000039280 Ighv1-49A0A0A6YWX2 117 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Gm7257D3YX25 99 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 A530064D06RikQ8BNV8 229 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Epg5Q80TA9 2572 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Znf740Q6NZQ6 180 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 P06328 117 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Fam216aQ9DB54 251 aa11.33□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Arhgap32Q811P8 2089 aa11.32□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Gm28539A0A087WSL9 92 aa11.32□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Igkv4-71A0A0G2JEH0 117 aa11.32□□□□□ -0.6
Scaf4-201ENSMUST00000039280 VcanQ62059 3357 aa11.32□□□□□ -0.6
Scaf4-201ENSMUST00000039280 RetnQ99P87 114 aa11.32□□□□□ -0.6
Scaf4-201ENSMUST00000039280 1500011B03RikQ3TTH7 73 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Igkv4-74A0A0B4J1I3 119 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Trav7-6A0A075B640 112 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Foxc1Q61572 553 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 4930415O20RikQ8CDT5 131 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Mpv17l2Q8VIK2 200 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Tomm7Q9D173 55 aa11.31□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Celsr1O35161 3034 aa11.3□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Morn5Q9DAI9 170 aa11.3□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Gm16223Q8CBM3 117 aa11.3□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Ighv8-5A0A0A6YY60 119 aa11.29□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Rmi2Q3UPE3 149 aa11.29□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Ndufs7Q9DC70 224 aa11.29□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Ighv2-3A0A075B696 115 aa11.29□□□□□ -0.6
Scaf4-201ENSMUST00000039280 OdaphJ3QNT8 126 aa11.29□□□□□ -0.6
Scaf4-201ENSMUST00000039280 LeprotO89013 131 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Leap2Q91V13 76 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Ucn2Q99ML8 113 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Ankrd11E9Q4F7 2643 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Gm20730A0A075B5J6 119 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Dmxl2Q8BPN8 3032 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Gm5629P06327 117 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Defa7P50705 93 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 CnfnQ6PCW6 111 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Fam110dQ80X91 271 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Mrpl35Q9CQL6 188 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Igkv4-59A0A0B4J1I8 117 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Rnase1P00683 149 aa11.28□□□□□ -0.6
Scaf4-201ENSMUST00000039280 HampQ9EQ21 83 aa11.27□□□□□ -0.6
Scaf4-201ENSMUST00000039280 Tmem213Q08EA8 116 aa11.27□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Defa23Q5G866 93 aa11.27□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Timm17aQ9Z0V8 171 aa11.27□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Defa4P28311 92 aa11.26□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Gm904Q3V2L5 102 aa11.26□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Gm9936Q8C864 160 aa11.26□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Q9D8Q6 235 aa11.26□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Vwc2lQ505H4 222 aa11.26□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Lyzl4Q9D925 145 aa11.26□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Hectd1Q69ZR2 2618 aaKnown RBP11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 March3Q8BRX9 218 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms