RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm11565A2A4M7 156 aa11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 P01753 117 aa11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 Rpl13aP19253 203 aaKnown RBP11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 Lrcol1Q3URS3 161 aa11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ifitm10Q8BR26 201 aa11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ighv2-7A0A075B5Q8 116 aa11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 P84751 237 aa11.02□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ncor2Q9WU42 2472 aaKnown RBP11.01□□□□□ -0.65
Nup54-201ENSMUST00000038514 Trav9-2A0A075B647 113 aa11.01□□□□□ -0.65
Nup54-201ENSMUST00000038514 Trav9-4A0A0B4J1K2 113 aa11.01□□□□□ -0.65
Nup54-201ENSMUST00000038514 Cfap126Q6P8X9 189 aa11.01□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ifitm1Q9D103 106 aa11.01□□□□□ -0.65
Nup54-201ENSMUST00000038514 Spg11Q3UHA3 2430 aa11.01□□□□□ -0.65
Nup54-201ENSMUST00000038514 Gm10135F6TEE5 83 aa11□□□□□ -0.65
Nup54-201ENSMUST00000038514 OdaphJ3QNT8 126 aa11□□□□□ -0.65
Nup54-201ENSMUST00000038514 Taf15Q8BQ46 557 aaKnown RBP11□□□□□ -0.65
Nup54-201ENSMUST00000038514 1810032O08RikE9PZV8 113 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Gm9925F6T2U3 160 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Rpl32-psP17932 135 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ndufs7Q9DC70 224 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ighv1-58A0A075B5W9 117 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ighv2-6-8A0A0A6YWY9 116 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Esp24A8R0V6 68 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 P04219 140 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Srp14P16254 110 aaKnown RBP10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 GalmQ8K157 342 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Lgals4Q8K419 326 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 MrapQ9D159 127 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 HampQ9EQ21 83 aa10.99□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ly6gP35461 111 aa10.98□□□□□ -0.65
Nup54-201ENSMUST00000038514 A530064D06RikQ8BNV8 229 aa10.98□□□□□ -0.65
Nup54-201ENSMUST00000038514 Gm29666A0A087WQ99 126 aa10.98□□□□□ -0.65
Nup54-201ENSMUST00000038514 Gm6793B2RXM2 351 aa10.98□□□□□ -0.65
Nup54-201ENSMUST00000038514 Anapc13Q8R034 74 aa10.98□□□□□ -0.65
Nup54-201ENSMUST00000038514 2310009B15RikA0A0A6YWI4 143 aa10.97□□□□□ -0.65
Nup54-201ENSMUST00000038514 Scgb1b24B1B0N6 92 aa10.97□□□□□ -0.65
Nup54-201ENSMUST00000038514 Gm10490F6VBM2 120 aa10.97□□□□□ -0.65
Nup54-201ENSMUST00000038514 Defb47Q30KN1 79 aa10.97□□□□□ -0.65
Nup54-201ENSMUST00000038514 3110070M22RikQ9DAQ7 118 aa10.97□□□□□ -0.65
Nup54-201ENSMUST00000038514 Zc2hc1bQ9D534 172 aa10.96□□□□□ -0.65
Nup54-201ENSMUST00000038514 Q9DAQ5 155 aa10.96□□□□□ -0.65
Nup54-201ENSMUST00000038514 Ighv5-9-1A0A0A6YVS4 126 aa10.96□□□□□ -0.66
Nup54-201ENSMUST00000038514 Smrp1Q2MH31 260 aa10.96□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gatd1Q8BFQ8 220 aa10.96□□□□□ -0.66
Nup54-201ENSMUST00000038514 Synj2bpQ9D6K5 145 aa10.96□□□□□ -0.66
Nup54-201ENSMUST00000038514 Dynlrb2Q9DAJ5 96 aa10.96□□□□□ -0.66
Nup54-201ENSMUST00000038514 Csmd2V9GX34 3611 aa10.96□□□□□ -0.66
Nup54-201ENSMUST00000038514 Col6a4A2AX52 2309 aa10.95□□□□□ -0.66
Nup54-201ENSMUST00000038514 B230217C12RikE9Q3Z1 139 aa10.95□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gm9887F6RFI0 207 aa10.95□□□□□ -0.66
Nup54-201ENSMUST00000038514 A930009A15RikG3UYI6 118 aa10.95□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gm9936Q8C864 160 aa10.95□□□□□ -0.66
Nup54-201ENSMUST00000038514 Pkd1l2Q7TN88 2461 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gm10509O88255 85 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Samd5Q3V1H9 173 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Ccl24Q9JKC0 119 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Ankhd1E9PUR0 2548 aaKnown RBP10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Qrich2A0A140LIY9 2337 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Igkv4-68A0A0B4J1I7 117 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gm21994F6T2D2 329 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Ly86O88188 162 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Trav7d-3Q5R1I1 112 aa10.94□□□□□ -0.66
Nup54-201ENSMUST00000038514 Rbmy1bQ60990 380 aa10.93□□□□□ -0.66
Nup54-201ENSMUST00000038514 AY761184Q9D848 116 aa10.93□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gm11444F6QMA6 170 aa10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 Ifi27l2aQ8R412 90 aa10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 Sptbn4E9PX29 2561 aa10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 Gata1P17679 413 aa10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 Rmi2Q3UPE3 149 aa10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 Cyyr1Q8VIH7 165 aa10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 Prpf8Q99PV0 2335 aaKnown RBP10.92□□□□□ -0.66
Nup54-201ENSMUST00000038514 4930442H23RikQ9D5G7 103 aa10.91□□□□□ -0.66
Nup54-201ENSMUST00000038514 NbeaQ9EPN1 2936 aa10.91□□□□□ -0.66
Nup54-201ENSMUST00000038514 Lrrk2Q5S006 2527 aa10.91□□□□□ -0.66
Nup54-201ENSMUST00000038514 Fhl2O70433 279 aa10.91□□□□□ -0.66
Nup54-201ENSMUST00000038514 Cox17P56394 63 aa10.91□□□□□ -0.66
Nup54-201ENSMUST00000038514 Sorl1O88307 2215 aaKnown RBP10.91□□□□□ -0.66
Nup54-201ENSMUST00000038514 Itpr3P70227 2670 aa10.9□□□□□ -0.66
Nup54-201ENSMUST00000038514 1700020N15RikL7MTX3 112 aa10.9□□□□□ -0.66
Nup54-201ENSMUST00000038514 Psmb8P28063 276 aa10.9□□□□□ -0.66
Nup54-201ENSMUST00000038514 Fgfbp3Q1HCM0 245 aa10.9□□□□□ -0.66
Nup54-201ENSMUST00000038514 March3Q8BRX9 218 aa10.9□□□□□ -0.66
Nup54-201ENSMUST00000038514 Ighv1-11A0A0A6YWI9 117 aa10.89□□□□□ -0.67
Nup54-201ENSMUST00000038514 Ighv1-72P01751 139 aa10.89□□□□□ -0.67
Nup54-201ENSMUST00000038514 AngP21570 145 aa10.89□□□□□ -0.67
Nup54-201ENSMUST00000038514 NrgnP60761 78 aa10.89□□□□□ -0.67
Nup54-201ENSMUST00000038514 SonQ9QX47 2444 aaKnown RBP10.89□□□□□ -0.67
Nup54-201ENSMUST00000038514 Fgf23Q9EPC2 251 aa10.89□□□□□ -0.67
Nup54-201ENSMUST00000038514 Gm9195A0A140LHT4 2805 aa10.88□□□□□ -0.67
Nup54-201ENSMUST00000038514 Gm20730A0A075B5J6 119 aa10.88□□□□□ -0.67
Nup54-201ENSMUST00000038514 Ube2e2Q91W82 201 aa10.88□□□□□ -0.67
Nup54-201ENSMUST00000038514 Gm10322F7D7I4 111 aa10.88□□□□□ -0.67
Nup54-201ENSMUST00000038514 CenpwQ3URR0 86 aa10.88□□□□□ -0.67
Nup54-201ENSMUST00000038514 Trav4-3A0A0B4J1K1 110 aa10.87□□□□□ -0.67
Nup54-201ENSMUST00000038514 Atp5g3P56384 141 aa10.87□□□□□ -0.67
Nup54-201ENSMUST00000038514 Timm17bQ9Z0V7 172 aa10.87□□□□□ -0.67
Nup54-201ENSMUST00000038514 Gm9747Q810H1 104 aa10.87□□□□□ -0.67
Nup54-201ENSMUST00000038514 Prr13Q9CQJ5 137 aa10.87□□□□□ -0.67
Nup54-201ENSMUST00000038514 Trav4d-3A0A075B625 110 aa10.86□□□□□ -0.67
Nup54-201ENSMUST00000038514 Trdv5A0A075B661 115 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms