RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Q24JP4 165 aa12.94□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Psors1c2Q80ZC9 134 aa12.94□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 4930474N05RikQ8BVR5 218 aa12.94□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Lhfpl3Q9CTN8 222 aa12.94□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Atoh7Q9Z2E5 149 aa12.94□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Lrp1bQ9JI18 4599 aa12.93□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Gm17472A0A075B683 117 aa12.93□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Sub1P11031 127 aaKnown RBP12.93□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Igll1P20764 209 aa12.93□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Ighv1-61P01749 117 aa12.92□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Vpreb2P13373 142 aa12.92□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Tmem241Q3UME2 297 aa12.92□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Fam241bQ9D882 120 aa12.92□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Gm21616B6ZB74 166 aa12.91□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Nat8b-psE0CYC6 232 aa12.91□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Trpc5osQ3UHV4 110 aa12.91□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Rhox4eQ504P9 205 aa12.91□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Atp5lQ9CPQ8 103 aa12.91□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Ighv2-9A0A075B5Q5 116 aa12.9□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Cd24P24807 76 aa12.9□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Kcnip3Q9QXT8 256 aa12.9□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 EsdQ9R0P3 282 aa12.9□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Gm14214V9GX35 225 aa12.9□□□□□ -0.34
Ttc39b-201ENSMUST00000030205 Gm5629P06327 117 aa12.89□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 AamdcQ8R0P4 122 aa12.89□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Tm4sf20Q9CQY8 226 aa12.89□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Gm26938S4R185 226 aa12.89□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Fat2Q5F226 4351 aa12.88□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Gm11213A0A1B0GR83 88 aa12.88□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 1700015F17RikD3YUK8 150 aa12.88□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 9530002B09RikQ9EPV7 135 aa12.88□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Zfp951A0A087WRH0 451 aa12.87□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 OdaphJ3QNT8 126 aa12.87□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Cfap126Q6P8X9 189 aa12.87□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Mzt2Q9CQ25 159 aa12.87□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Srsf9Q9D0B0 222 aaKnown RBP12.87□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Snai3Q9QY31 287 aa12.87□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Atp5iQ06185 71 aaKnown RBP12.86□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Smim9Q3V0X1 137 aa12.86□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Prss58Q8BW11 241 aa12.86□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Gpr15lA0A0B4J1N3 78 aa12.85□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Gm14325A2AW67 498 aa12.85□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 AsipQ03288 131 aa12.85□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Srek1ip1Q4V9W2 153 aa12.85□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 4930519P11RikQ9CUJ8 166 aa12.85□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Gm10065F6TJM2 114 aa12.84□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Igf1P05017 153 aa12.84□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Rpl37aP61514 92 aa12.84□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Gm5617Q91VN2 117 aa12.84□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Mgst1Q91VS7 155 aa12.84□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Lrp2A2ARV4 4660 aa12.83□□□□□ -0.35
Ttc39b-201ENSMUST00000030205 Igkv4-78A0A0A6YYE5 119 aa12.83□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Plac8l1Q08EJ0 177 aa12.83□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Tex261Q62302 196 aa12.83□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 CnfnQ6PCW6 111 aa12.82□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Ndufa12Q7TMF3 145 aaKnown RBP12.82□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Gm9944Q8C559 102 aa12.82□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Tcrg-C1A0A075B5Z0 172 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Igkv4-92A0A0B4J1I2 117 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Krtap29-1A2A5X4 342 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Tcrg-C3L7N479 172 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 NpsP0C0P8 89 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Cd33Q63994 403 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 1700029F12RikQ9CRB4 147 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 9430069I07RikQ9CX21 111 aa12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Slc25a20Q9Z2Z6 301 aaKnown RBP12.81□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Gm28044L7N1X0 119 aa12.79□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Prm1P02319 51 aa12.79□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Defa10P50708 93 aa12.79□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 March3Q8BRX9 218 aa12.79□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Ube2wQ8VDW4 151 aa12.79□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Trav7-6A0A075B640 112 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Igkv6-13A0A0G2JGY3 119 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Omt2bD3YX29 119 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 TcraP01849 138 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Prp2P05143 317 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Gpx7Q99LJ6 186 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 Znf414Q9DCK4 299 aa12.78□□□□□ -0.36
Ttc39b-201ENSMUST00000030205 1700025B11RikA0A087WNZ6 93 aa12.77□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Gm6793B2RXM2 351 aa12.77□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 P01793 123 aa12.77□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Hnrnpa3Q8BG05 379 aaKnown RBP12.77□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Eif5a2Q8BGY2 153 aaKnown RBP12.77□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Gm16223Q8CBM3 117 aa12.77□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Igkv3-2A0A075B5P0 119 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Trav14n-3A0A075B645 120 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Trav14d-1A0A075B6B1 121 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Gm7735D3YX18 52 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Umad1E0CX23 159 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Sem1P60897 70 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Pex7P97865 318 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Tmed6Q9CQG0 239 aa12.76□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Adcyap1O70176 175 aa12.75□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Trav3-3Q5R1C3 114 aa12.75□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Ndufa1O35683 70 aa12.74□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Esp3J3QN49 87 aa12.73□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Defa9P50707 93 aa12.73□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 OstcQ78XF5 149 aa12.73□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Gm45785A0A1B0GT05 94 aa12.72□□□□□ -0.37
Ttc39b-201ENSMUST00000030205 Tmem238A9JSM3 176 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 172.3 ms