RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Gm19935A0A1B0GSF9 52 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm17324Q8C6J8 137 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm10192Q3V0S1 108 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ndufa4l2Q4FZG9 87 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm9949Q8C9F4 104 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Plxnb1Q8CJH3 2119 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ly6hQ9WUC3 139 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Nav2E9Q842 2432 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Trbv16A0A0B4J1H3 115 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 B230104I21RikQ3USW4 141 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 A130051J06RikQ8CAU1 227 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Tm2d2Q8R0I4 213 aa9.37□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Klk11Q9QYN3 276 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 BlcapP62951 87 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Odf3l1Q810P2 275 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 TroQ6DIC6 2087 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Tsc2Q61037 1814 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Fxyd5P97808 178 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ighv3-4A0A0A6YXF1 117 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Fam19a5Q91WE9 132 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Rnf114Q9ET26 229 aa9.36□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 P01630 113 aa9.35□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Msrb2Q78J03 175 aa9.35□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 P06320 134 aa9.35□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Wfdc15bQ9JHY4 80 aa9.35□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ighv1-11A0A0A6YWI9 117 aa9.35□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Baz2aQ91YE5 1889 aaKnown RBP9.35□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Plxna1P70206 1894 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 PtprqP0C5E4 2300 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm12353A2AGJ4 60 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Sec61gP60060 68 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Ube2d4D3YUH6 135 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Gm4861Q8C5A4 106 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 Tanc1Q0VGY8 1856 aa9.34□□□□□ -0.91
Pcdhac1-201ENSMUST00000007584 P04944 107 aa9.34□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Igkv8-18A0A0B4J1J3 123 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Tfpi2O35536 230 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Atox1O08997 68 aaKnown RBP9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm10775Q3V290 127 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Prr12E9PYL2 2035 aaKnown RBP9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Alms1Q8K4E0 3251 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm17577J3QNF7 156 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Smrp1Q2MH31 260 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Camk2n2Q78WH7 79 aa9.33□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 GfyJ3KML8 504 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 P01659 112 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 P01729 129 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Zc2hc1bQ9D534 172 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 AW146154Q3TPQ7 468 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 9230109A22RikQ8BHE6 111 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm12689Q8BQU9 117 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Q99M08 65 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Pla2g2eQ9QUL3 142 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Sbf2E9PXF8 1872 aa9.32□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm17521F6QAC8 156 aa9.31□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 PrcdQ00LT2 53 aa9.31□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm20708H3BKF4 155 aa9.31□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm5629P06327 117 aa9.31□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Ndufb1P0DN34 57 aa9.31□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 ColqO35348 457 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 FcorP0DJI6 106 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 P84751 237 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Wfdc10Q3V2J9 124 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 A830031A19RikQ8BNT5 113 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Bcorl1A2AQH4 1781 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 P06328 117 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Smim1P0C8K7 78 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Fancd2osQ9D4K4 178 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Ralgapa2A3KGS3 1872 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Ly75Q60767 1723 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Ntf4Q80VU4 209 aa9.3□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Adamts9E9PUN6 1931 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Cox7b2Q9D2H1 82 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Serp1Q9Z1W5 66 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Ighv1-53A0A075B5W3 117 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 2310009B15RikA0A0A6YWI4 143 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 P01748 117 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Gm10401E9Q3K6 71 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 ScxQ64124 207 aa9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Zswim8Q3UHH1 1832 aaKnown RBP9.29□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Ncor1Q60974 2453 aa9.28□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Pglyrp1O88593 182 aa9.28□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 5730596B20RikQ8BQ08 205 aa9.28□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Igkv1-110A0A0B4J1I0 119 aa9.28□□□□□ -0.92
Pcdhac1-201ENSMUST00000007584 Tmem223Q9CQE2 199 aaKnown RBP9.27□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Arhgef17Q80U35 2057 aa9.27□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Gm9970F6ZED4 185 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Fam110dQ80X91 271 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Q9D8Q6 235 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ighv1-61P01749 117 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Igkv1-117A0A140T8M0 119 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 P01747 120 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Rnf185Q91YT2 192 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 4930470P17RikQ9D542 155 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Pappa2E9PZ87 1789 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Eml6Q5SQM0 1958 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Igkv3-5A0A140T8M6 119 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Col8a2P25318 699 aa9.26□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Ighv2-7A0A075B5Q8 116 aa9.25□□□□□ -0.93
Pcdhac1-201ENSMUST00000007584 Igkv3-10A0A0G2JGN0 119 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms