RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Akap6E9Q9K8 2307 aa9.1□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Trav4-3A0A0B4J1K1 110 aa9.1□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Ighv1-53A0A075B5W3 117 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 P01748 117 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Cox7cP17665 63 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Fam222aQ6PGH4 453 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Trav13n-2A0A0G2JF93 110 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Ahctf1Q8CJF7 2243 aaKnown RBP9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Vsig4F6TUL9 280 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Cacna1hO88427 2365 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 1810032O08RikE9PZV8 113 aa9.09□□□□□ -0.95
Scn8a-208ENSMUST00000200963 Gm15557A6PWY0 234 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Nckap5E9QAE1 1909 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Prr14lE9Q7C4 1971 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Iglc1A0A0G2JE99 106 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 P01843 105 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Plxna2P70207 1894 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm37389A0A0A6YW05 95 aa9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Tmem223Q9CQE2 199 aaKnown RBP9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 MylkQ6PDN3 1941 aaKnown RBP9.08□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Trav7-6A0A075B640 112 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Igkv1-35A0A0G2JDE5 120 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Fgf6P21658 208 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Klk5Q9D140 293 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Cacna1eQ61290 2272 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Trav9n-4A0A075B631 113 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Pkd1l3Q2EG98 2201 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Trav11A0A0B4J1J9 114 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 PoleQ9WVF7 2283 aa9.07□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm17677B3GLJ5 116 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm10295Q8CCF3 114 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm6034E9Q101 117 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm19684G3UZ45 117 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 9530003J23RikQ8BM26 151 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Ros1Q78DX7 2340 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 CstadQ9D245 104 aa9.06□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Igkv3-4A0A140T8Q4 119 aa9.05□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm10542F6XDR3 90 aa9.05□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm12353A2AGJ4 60 aa9.05□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm15217A2CG07 155 aa9.05□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Rnase1P00683 149 aa9.05□□□□□ -0.96
Scn8a-208ENSMUST00000200963 NrgnP60761 78 aa9.05□□□□□ -0.96
Scn8a-208ENSMUST00000200963 MsmpB1AWI6 139 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 9430069I07RikQ9CX21 111 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm20708H3BKF4 155 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Trbv16A0A0B4J1H3 115 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 SvipQ3UZP4 77 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Cdpf1Q8R3A2 119 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Cep295Q8BQ48 2412 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 7420426K07RikQ3UX66 186 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Vpreb3D3Z6J4 130 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Sh2d1aO88890 126 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Naa38Q9D2U5 125 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Bdp1Q571C7 2467 aa9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 TprF6ZDS4 2431 aaKnown RBP9.04□□□□□ -0.96
Scn8a-208ENSMUST00000200963 SptssbQ925E8 76 aa9.03□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Col8a2P25318 699 aa9.03□□□□□ -0.96
Scn8a-208ENSMUST00000200963 4930470P17RikQ9D542 155 aa9.03□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Gm42674D3YUT9 64 aa9.03□□□□□ -0.96
Scn8a-208ENSMUST00000200963 Asxl3Q8C4A5 2259 aa9.03□□□□□ -0.96
Scn8a-208ENSMUST00000200963 9130230L23RikQ8CC80 163 aa9.02□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Igkv3-3A0A140T8Q0 119 aa9.02□□□□□ -0.97
Scn8a-208ENSMUST00000200963 NpyP57774 97 aa9.02□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Nsun4C4P6S0 806 aaKnown RBP9.02□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Crip1P63254 77 aa9.02□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Ighv8-12A0A0G2JDE1 119 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Rpl39lQ9CQD0 51 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 1700010B08RikQ9DAI7 102 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 E030018B13RikJ3QMS9 113 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 U90926O08546 118 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 P84751 237 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Iglv1A0A075B663 117 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 IgipA0A1B0GR74 53 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 P04943 107 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Spry4Q9WTP2 300 aa9.01□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Tmem131O70472 1877 aa9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Gm14137Q8CE97 175 aa9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Eml5Q8BQM8 1977 aa9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Sptbn1Q62261 2363 aaKnown RBP9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Kif26aQ52KG5 1881 aa9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Sec61gP60060 68 aa9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Zfp407G3UVV3 2246 aa9□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Igkv4-92A0A0B4J1I2 117 aa8.99□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Odf3l1Q810P2 275 aa8.99□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Fam19a1Q7TPG8 133 aa8.99□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Ighv1-11A0A0A6YWI9 117 aa8.99□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Gm26602M0QWA4 95 aa8.99□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Ormdl1Q921I0 153 aa8.99□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Gm17521F6QAC8 156 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Vpreb2P13373 142 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Nup210lQ9D2F7 1881 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Esm1Q9QYY7 184 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Tfpi2O35536 230 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 P01747 120 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 ColqO35348 457 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 P04944 107 aa8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Dock7Q8R1A4 2130 aaKnown RBP8.98□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Spry2Q9QXV8 315 aa8.97□□□□□ -0.97
Scn8a-208ENSMUST00000200963 P06328 117 aa8.97□□□□□ -0.97
Scn8a-208ENSMUST00000200963 Greb1Q3UHK3 1954 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 86.2 ms