RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Cox8bP48772 70 aa18.76■□□□□ 0.59
Tpm1-216ENSMUST00000113707 AamdcQ8R0P4 122 aa18.76■□□□□ 0.59
Tpm1-216ENSMUST00000113707 PrlhG3UWC3 86 aa18.75■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Trav7d-3Q5R1I1 112 aa18.75■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Ifi27l2bQ8VC49 283 aa18.75■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Gm815Q3UWS2 115 aa18.75■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Zfp867E9Q2M4 473 aa18.74■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Htr1dQ61224 374 aa18.74■□□□□ 0.59
Tpm1-216ENSMUST00000113707 NipblQ6KCD5 2798 aaKnown RBP18.74■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Dmbt1Q60997 2085 aa18.74■□□□□ 0.59
Tpm1-216ENSMUST00000113707 B230217C12RikE9Q3Z1 139 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Vsig4F6TUL9 280 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Tcl1b4P56844 120 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Polr2kQ63871 58 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Trav6-6A0A075B603 114 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Gm765B2RVL9 189 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 P01738 130 aa18.73■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Helz2E9QAM5 2947 aaKnown RBP18.72■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Q99M08 65 aa18.72■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Gm28305F6U473 122 aa18.71■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Nat8f4G5E8L3 226 aa18.71■□□□□ 0.59
Tpm1-216ENSMUST00000113707 Ighv8-8A0A0A6YXQ0 119 aa18.7■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Aqp7O54794 303 aa18.7■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Gm10509O88255 85 aa18.7■□□□□ 0.58
Tpm1-216ENSMUST00000113707 A830031A19RikQ8BNT5 113 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Trbv13-1A0A0B4J1P8 112 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Rpl36-ps4A0A140T8U4 117 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Ccl17F6R5P4 103 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Gm5629P06327 117 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 P06329 120 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Egr2P08152 470 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Mllt11P97783 90 aa18.69■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Akap13E9Q394 2776 aa18.68■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Rpl35aO55142 110 aa18.68■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Cox17P56394 63 aa18.68■□□□□ 0.58
Tpm1-216ENSMUST00000113707 SbpP15501 199 aa18.67■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Fxyd5P97808 178 aa18.67■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Lyzl4Q9D925 145 aa18.67■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Trav9n-2A0A0G2JDP3 113 aa18.66■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Cox7a2lQ61387 111 aa18.66■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Tnfrsf23Q9ER63 176 aa18.66■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Ceacam15A0A0B4J1L0 234 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Mrpl35Q9CQL6 188 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Q9D8Q6 235 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Tenm4Q3UHK6 2771 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Ighv1-85A0A075B5Y6 117 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Scgb1b19F6WYW0 93 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Hspb8Q9JK92 196 aa18.65■□□□□ 0.58
Tpm1-216ENSMUST00000113707 Fbn1Q61554 2873 aaKnown RBP18.64■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Tcrg-V4A0A0B4J1J8 138 aa18.64■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Trav3-3Q5R1C3 114 aa18.64■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Morn3Q8C5T4 241 aa18.64■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Zmat5Q9CQR5 170 aa18.64■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Gm17359A0A0G2JEB7 487 aa18.63■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Gm14137Q8CE97 175 aa18.63■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Esm1Q9QYY7 184 aa18.63■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Ssbp1Q9CYR0 152 aaKnown RBP18.63■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Zcwpw2Q08EN7 125 aa18.62■□□□□ 0.57
Tpm1-216ENSMUST00000113707 A530064D06RikQ8BNV8 229 aa18.62■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Josd1Q9DBJ6 202 aa18.62■□□□□ 0.57
Tpm1-216ENSMUST00000113707 HampQ9EQ21 83 aa18.62■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Chac1Q8R3J5 223 aa18.61■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Tmem263Q9DAM7 115 aa18.61■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Ndufs7Q9DC70 224 aa18.61■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Fgfbp3Q1HCM0 245 aa18.6■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Trav6n-6A0A075B6B2 114 aa18.59■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Trav3n-3A0A0G2JEM0 114 aa18.59■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Defa24Q5G865 93 aa18.59■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Cib3Q0P523 160 aa18.58■□□□□ 0.57
Tpm1-216ENSMUST00000113707 Uqcc3Q8K2T4 89 aa18.58■□□□□ 0.57
Tpm1-216ENSMUST00000113707 TcraP01849 138 aa18.58■□□□□ 0.56
Tpm1-216ENSMUST00000113707 4930596D02RikQ3V0H9 216 aa18.58■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Ss18Q62280 418 aa18.57■□□□□ 0.56
Tpm1-216ENSMUST00000113707 5930422O12RikQ8C4Y4 123 aa18.57■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Prss29Q99MS4 279 aa18.57■□□□□ 0.56
Tpm1-216ENSMUST00000113707 TtrP07309 147 aa18.56■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Trappc1Q5NCF2 145 aa18.56■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Cysltr1Q99JA4 352 aa18.56■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Scgb1b24B1B0N6 92 aa18.55■□□□□ 0.56
Tpm1-216ENSMUST00000113707 NpsP0C0P8 89 aa18.55■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Ammecr1lQ8JZZ6 310 aa18.55■□□□□ 0.56
Tpm1-216ENSMUST00000113707 GfyJ3KML8 504 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 BC025920Q3US60 128 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 CrygfQ9CXV3 174 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 P01794 123 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 PpbpQ9EQI5 113 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Rnf114Q9ET26 229 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Itpr2Q9Z329 2701 aa18.54■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Krtap16-1A2A5X5 502 aa18.53■□□□□ 0.56
Tpm1-216ENSMUST00000113707 P0C913 63 aa18.53■□□□□ 0.56
Tpm1-216ENSMUST00000113707 March3Q8BRX9 218 aa18.53■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Snx22Q8C084 192 aa18.53■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Chchd7Q8K2Q5 85 aa18.53■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Ovol2Q8CIV7 274 aa18.52■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Tex48Q9DA81 110 aa18.52■□□□□ 0.56
Tpm1-216ENSMUST00000113707 Trdv2-1A0A0G2JGB9 116 aa18.52■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Rpl39P62892 51 aa18.52■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Ndufc2Q9CQ54 120 aa18.51■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Nop10Q9CQS2 64 aa18.51■□□□□ 0.55
Tpm1-216ENSMUST00000113707 9530053A07RikE9PVG8 2581 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 155 ms