RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Q9D727 114 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Erg28Q9ERY9 140 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Ccl19O70460 108 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Tmem170bP86050 132 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Mllt11P97783 90 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 8030423J24RikQ9CX45 142 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Spata25Q9DA57 226 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Nav3Q80TN7 2359 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Brd3osA0A1B0GRB6 84 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Csn3P06796 181 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Rpl39P62892 51 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Rpl32P62911 135 aaKnown RBP11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Hbb-bsA8DUK4 147 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Arid1bE9Q4N7 2244 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Hbb-b1P02088 147 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Htr1dQ61224 374 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Lyzl4Q9D925 145 aa11.47□□□□□ -0.57
Vcan-201ENSMUST00000109543 Klk1b4P00757 256 aa11.46□□□□□ -0.57
Vcan-201ENSMUST00000109543 Rnf183Q8QZS5 190 aa11.46□□□□□ -0.57
Vcan-201ENSMUST00000109543 Avpi1Q9D7H4 142 aa11.46□□□□□ -0.57
Vcan-201ENSMUST00000109543 HampQ9EQ21 83 aa11.46□□□□□ -0.57
Vcan-201ENSMUST00000109543 BC067074F6RXI4 2391 aa11.46□□□□□ -0.58
Vcan-201ENSMUST00000109543 Srp14P16254 110 aaKnown RBP11.46□□□□□ -0.58
Vcan-201ENSMUST00000109543 Snx22Q8C084 192 aa11.46□□□□□ -0.58
Vcan-201ENSMUST00000109543 Ankrd17Q99NH0 2603 aaKnown RBP11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm29289A0A087WPY7 166 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm4064A0A087WR82 380 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm10352B2RWR6 380 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm21693J3QK27 380 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Rbmy1a1O35698 380 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Ovol2Q8CIV7 274 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Mustn1Q99JI1 82 aa11.45□□□□□ -0.58
Vcan-201ENSMUST00000109543 Trbv30A0A0B4J1P1 111 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Runx1Q03347 451 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Cks1brtQ3UNC9 96 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gng7Q61016 68 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Rnase1P00683 149 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 P01802 115 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Bsph2Q0Q236 131 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Ss18Q62280 418 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 AamdcQ8R0P4 122 aa11.44□□□□□ -0.58
Vcan-201ENSMUST00000109543 Trav8-1A0A075B641 109 aa11.43□□□□□ -0.58
Vcan-201ENSMUST00000109543 Mcrip2Q9CQB2 160 aaKnown RBP11.43□□□□□ -0.58
Vcan-201ENSMUST00000109543 AngP21570 145 aa11.43□□□□□ -0.58
Vcan-201ENSMUST00000109543 BC025920Q3US60 128 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 Vps25Q9CQ80 176 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 Igkv2-137A0A0B4J1H6 120 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm10490F6VBM2 120 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 Tcrg-C3L7N479 172 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 P01837 106 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 P03985 172 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 MturnQ8CGA4 131 aa11.42□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm3443F7CCV5 94 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 Fam240aJ3QNP9 97 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 Ank2Q8C8R3 3898 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 Krtap27-1E9PX37 202 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 4930596D02RikQ3V0H9 216 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 Mapk1ip1lQ8BH93 242 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 4930470P17RikQ9D542 155 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 Pradc1Q9D9N8 188 aa11.41□□□□□ -0.58
Vcan-201ENSMUST00000109543 Col7a1Q63870 2944 aa11.4□□□□□ -0.58
Vcan-201ENSMUST00000109543 Ighv1-85A0A075B5Y6 117 aa11.4□□□□□ -0.58
Vcan-201ENSMUST00000109543 Defa34D3Z0J0 93 aa11.4□□□□□ -0.58
Vcan-201ENSMUST00000109543 F11rO88792 300 aa11.4□□□□□ -0.58
Vcan-201ENSMUST00000109543 Defb26Q30KN7 186 aa11.4□□□□□ -0.58
Vcan-201ENSMUST00000109543 Ndufs7Q9DC70 224 aa11.4□□□□□ -0.58
Vcan-201ENSMUST00000109543 Gm28044L7N1X0 119 aa11.4□□□□□ -0.59
Vcan-201ENSMUST00000109543 Bak1O08734 209 aa11.4□□□□□ -0.59
Vcan-201ENSMUST00000109543 Smim1P0C8K7 78 aa11.4□□□□□ -0.59
Vcan-201ENSMUST00000109543 CubnQ9JLB4 3623 aa11.4□□□□□ -0.59
Vcan-201ENSMUST00000109543 Defa37K9J724 93 aa11.39□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm26727M0QWT1 121 aa11.39□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm26661M0QWV4 156 aa11.39□□□□□ -0.59
Vcan-201ENSMUST00000109543 P01786 117 aa11.39□□□□□ -0.59
Vcan-201ENSMUST00000109543 Defa5P28312 93 aa11.39□□□□□ -0.59
Vcan-201ENSMUST00000109543 Tal2Q62282 108 aa11.39□□□□□ -0.59
Vcan-201ENSMUST00000109543 BsnO88737 3942 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Smim10l1A0A087WNQ7 89 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Igkv4-68A0A0B4J1I7 117 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Plscr4P58196 326 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm1553Q66VB7 94 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Nf1Q04690 2841 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Pdzd2E9Q1M1 2796 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 B230217C12RikE9Q3Z1 139 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 P06329 120 aa11.38□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm2564F6Z9S8 108 aa11.37□□□□□ -0.59
Vcan-201ENSMUST00000109543 Defa13P50711 93 aa11.37□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm44965A0A0N4SVR3 59 aa11.37□□□□□ -0.59
Vcan-201ENSMUST00000109543 FcorP0DJI6 106 aa11.37□□□□□ -0.59
Vcan-201ENSMUST00000109543 Q5BN45 167 aa11.37□□□□□ -0.59
Vcan-201ENSMUST00000109543 Tm4sf20Q9CQY8 226 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 Plac1Q9JI83 173 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 TtrP07309 147 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 Gm7489Q3UT34 171 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 Fam110dQ80X91 271 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 A530064D06RikQ8BNV8 229 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 Ifi27l2aQ8R412 90 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 Chd6A3KFM7 2711 aa11.36□□□□□ -0.59
Vcan-201ENSMUST00000109543 FlnaQ8BTM8 2647 aaKnown RBP11.35□□□□□ -0.59
Vcan-201ENSMUST00000109543 GalmQ8K157 342 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms