RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 P01659 112 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Gm17324Q8C6J8 137 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Pip4p2Q9CZX7 257 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Dand5Q76LW6 185 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 3110082J24RikF6Z6Z2 108 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Malrd1A2AJX4 2123 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Smim1P0C8K7 78 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Ccl3P10855 92 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 9930022D16RikQ8BG27 128 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Igkv3-2A0A075B5P0 119 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Spry2Q9QXV8 315 aa12.69□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Igkv1-122A0A140T8M9 119 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Gm7075D3Z497 112 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 P04940 107 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 P04941 107 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 A730015C16RikQ8C992 119 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 ThadaA8C756 1938 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Rpl35aO55142 110 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Cox17P56394 63 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Spry4Q9WTP2 300 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Igkv3-9A0A140T8P4 119 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 P04942 107 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 H2al1aQ5M8Q2 105 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 H2al1eQ810S6 105 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Lypd6Q8BPP5 171 aa12.68□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Rnf138Q9CQE0 245 aaKnown RBP12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 PspnO70300 156 aa12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Sec61gP60060 68 aa12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Fam216bQ8CC14 138 aa12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Klk12B2RVZ0 247 aa12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 LoxP28301 411 aa12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Ighv1-50A0A075B5W1 117 aa12.67□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Msrb2Q78J03 175 aa12.66□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Klk13Q8CGR6 276 aa12.66□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Fhl4Q8CDC8 279 aa12.66□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Plxna3P70208 1872 aa12.66□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Gm15217A2CG07 155 aa12.66□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Wipf1Q8K1I7 493 aa12.65□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Crybg1A0A0G2JG52 2065 aa12.65□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Serp1Q9Z1W5 66 aa12.65□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Ntf4Q80VU4 209 aa12.65□□□□□ -0.38
Col17a1-202ENSMUST00000086923 H2al1kJ3QP08 105 aa12.65□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Ndufa4l2Q4FZG9 87 aa12.65□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Ndufs7Q9DC70 224 aa12.65□□□□□ -0.39
Col17a1-202ENSMUST00000086923 P01786 117 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 P04219 140 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 A130051J06RikQ8CAU1 227 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Gm19410A0A140LJC7 2098 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Dock4P59764 1978 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Dido1Q8C9B9 2256 aaKnown RBP12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Ighv8-11A0A075B5X4 119 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Pde6gP09174 87 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 BlcapP62951 87 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Gata4Q08369 441 aa12.64□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Rpl39lQ9CQD0 51 aa12.63□□□□□ -0.39
Col17a1-202ENSMUST00000086923 F5O88783 2183 aa12.63□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Rnf152Q8BG47 203 aa12.63□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Ighv1-74A0A0G2JGK2 117 aa12.63□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Defb33Q30KN3 62 aa12.63□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Plxnb3Q9QY40 1902 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 2310009B15RikA0A0A6YWI4 143 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Klk9Q32M27 251 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 4930535I16RikQ9CUI2 172 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Myo7bQ99MZ6 2113 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Trav13-1A0A075B644 110 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Plxna4Q80UG2 1893 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Gm7257D3YX25 99 aa12.62□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Cdip1Q9DB75 208 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 H2al1bA0A087WP11 105 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 P01630 113 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 P01750 117 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Cmc4Q61908 68 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Zfhx2Q2MHN3 2562 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Ly6hQ9WUC3 139 aa12.61□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Gm20604F8WIA3 75 aa12.6□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Col11a1Q61245 1804 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Crip3Q6Q6R3 243 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Prr15lQ8JZM2 100 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Leap2Q91V13 76 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 GrnP28798 589 aaKnown RBP12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Pcnx1Q9QYC1 2344 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 TroQ6DIC6 2087 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Prr12E9PYL2 2035 aaKnown RBP12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Ighv5-9-1A0A0A6YVS4 126 aa12.59□□□□□ -0.39
Col17a1-202ENSMUST00000086923 P01753 117 aa12.58□□□□□ -0.39
Col17a1-202ENSMUST00000086923 StrcQ8VIM6 1809 aa12.58□□□□□ -0.39
Col17a1-202ENSMUST00000086923 Q9D8Q6 235 aa12.58□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Trav13-2A0A075B649 110 aa12.58□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm10518F6UQQ9 182 aa12.58□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Fxyd5P97808 178 aa12.58□□□□□ -0.4
Col17a1-202ENSMUST00000086923 B230359F08RikA0A0B4J1K3 109 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm10542F6XDR3 90 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Frem1Q684R7 2191 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Trbv16A0A0B4J1H3 115 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 P04944 107 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Crlf1Q9JM58 425 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Notch4P31695 1964 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Col4a5Q63ZW6 1691 aa12.57□□□□□ -0.4
Col17a1-202ENSMUST00000086923 Gm5629P06327 117 aa12.56□□□□□ -0.4
Col17a1-202ENSMUST00000086923 4930432M17RikQ3V0W9 174 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms