RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Crip1P63254 77 aa13.39□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm15217A2CG07 155 aa13.39□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm15557A6PWY0 234 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Egr2P08152 470 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Ighv2-7A0A075B5Q8 116 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gata1P17679 413 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Cdpf1Q8R3A2 119 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Ucn2Q99ML8 113 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Trav13n-1A0A0G2JEU8 110 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Q99M08 65 aa13.38□□□□□ -0.27
Usp48-201ENSMUST00000055131 Tmem243B2RVB9 118 aa13.37□□□□□ -0.27
Usp48-201ENSMUST00000055131 Pglyrp1O88593 182 aa13.37□□□□□ -0.27
Usp48-201ENSMUST00000055131 Trav13d-4A0A0G2JFX3 110 aa13.37□□□□□ -0.27
Usp48-201ENSMUST00000055131 TectaO08523 2155 aa13.37□□□□□ -0.27
Usp48-201ENSMUST00000055131 Fam19a4Q7TPG5 135 aa13.37□□□□□ -0.27
Usp48-201ENSMUST00000055131 Trav13d-1A0A075B606 110 aa13.36□□□□□ -0.27
Usp48-201ENSMUST00000055131 IgipA0A1B0GR74 53 aa13.36□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm10251J3QPM5 127 aa13.36□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm2916Q9D9B9 127 aa13.36□□□□□ -0.27
Usp48-201ENSMUST00000055131 P04943 107 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 9130230L23RikQ8CC80 163 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Tm2d2Q8R0I4 213 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Heatr5aQ5PRF0 2038 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Cox7cP17665 63 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm9936Q8C864 160 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Prop1P97458 223 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 PemtQ61907 199 aa13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Prpf8Q99PV0 2335 aaKnown RBP13.35□□□□□ -0.27
Usp48-201ENSMUST00000055131 Igkv8-26A0A075B5N5 123 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 1810032O08RikE9PZV8 113 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Iglc1A0A0G2JE99 106 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 P01843 105 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Plscr4P58196 326 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Mrpl35Q9CQL6 188 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm17472A0A075B683 117 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Vsig4F6TUL9 280 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 NpyP57774 97 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Gm10518F6UQQ9 182 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Crybg1A0A0G2JG52 2065 aa13.34□□□□□ -0.27
Usp48-201ENSMUST00000055131 Atp5g3P56384 141 aa13.33□□□□□ -0.27
Usp48-201ENSMUST00000055131 Atp5g1Q9CR84 136 aa13.33□□□□□ -0.27
Usp48-201ENSMUST00000055131 Ighv3-1A0A075B5S6 116 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Ighv1-53A0A075B5W3 117 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Gm15128A2ADW8 449 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Luzp4B1AV09 449 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Gm15107B1B0X0 449 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 P01748 117 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Map6d1Q14BB9 191 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Gm15085Q62012 449 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 MgamB5THE2 1827 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Gm15127B1AVZ5 449 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 E030018B13RikJ3QMS9 113 aa13.33□□□□□ -0.28
Usp48-201ENSMUST00000055131 Rbm3O89086 153 aaKnown RBP13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 Timm17aQ9Z0V8 171 aa13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 Col5a3Q9JLI2 1739 aa13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 Ighv12-3A0A075B5T1 117 aa13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 Trav13-2A0A075B649 110 aa13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 Nsun4C4P6S0 806 aaKnown RBP13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 Ly6g5bQ8K1T4 194 aa13.32□□□□□ -0.28
Usp48-201ENSMUST00000055131 TncQ80YX1 2110 aa13.31□□□□□ -0.28
Usp48-201ENSMUST00000055131 P04944 107 aa13.31□□□□□ -0.28
Usp48-201ENSMUST00000055131 A230072I06RikQ3UUJ8 172 aa13.31□□□□□ -0.28
Usp48-201ENSMUST00000055131 P01745 121 aa13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 Arhgap21Q6DFV3 1944 aa13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 Igkv1-88A0A140T8N1 120 aa13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 P01658 132 aa13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 7420426K07RikQ3UX66 186 aa13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 Oxld1Q9CR10 201 aa13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 Anapc1P53995 1944 aaKnown RBP13.3□□□□□ -0.28
Usp48-201ENSMUST00000055131 Trav13-4-dv7A0A075B6C2 110 aa13.29□□□□□ -0.28
Usp48-201ENSMUST00000055131 Gm42674D3YUT9 64 aa13.29□□□□□ -0.28
Usp48-201ENSMUST00000055131 Dopey2Q3UHQ6 2295 aa13.29□□□□□ -0.28
Usp48-201ENSMUST00000055131 Gm17359A0A0G2JEB7 487 aa13.29□□□□□ -0.28
Usp48-201ENSMUST00000055131 Trav7-6A0A075B640 112 aa13.29□□□□□ -0.28
Usp48-201ENSMUST00000055131 Mlst8Q9DCJ1 326 aa13.29□□□□□ -0.28
Usp48-201ENSMUST00000055131 B230359F08RikA0A0B4J1K3 109 aa13.28□□□□□ -0.28
Usp48-201ENSMUST00000055131 AvpP35455 168 aa13.28□□□□□ -0.28
Usp48-201ENSMUST00000055131 Trav13-1A0A075B644 110 aa13.28□□□□□ -0.28
Usp48-201ENSMUST00000055131 ColqO35348 457 aa13.27□□□□□ -0.28
Usp48-201ENSMUST00000055131 Ociad2Q9D8W7 154 aa13.27□□□□□ -0.28
Usp48-201ENSMUST00000055131 Klk5Q9D140 293 aa13.27□□□□□ -0.28
Usp48-201ENSMUST00000055131 PkdrejQ9Z0T6 2126 aa13.27□□□□□ -0.29
Usp48-201ENSMUST00000055131 Trav4d-3A0A075B625 110 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Odf3l1Q810P2 275 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Gm10295Q8CCF3 114 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Trav13n-2A0A0G2JF93 110 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Trbv16A0A0B4J1H3 115 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Gm10542F6XDR3 90 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Gata3P23772 443 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 AngP21570 145 aa13.26□□□□□ -0.29
Usp48-201ENSMUST00000055131 Sdk2Q6V4S5 2176 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 Klk12B2RVZ0 247 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 Gm9958Q8C9U4 106 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 CadB2RQC6 2225 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 Iglv1A0A075B663 117 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 Ebi3O35228 228 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 Camk2n2Q78WH7 79 aa13.25□□□□□ -0.29
Usp48-201ENSMUST00000055131 Igkv2-109A0A075B5K6 120 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 Higd2aQ9CQJ1 106 aa13.24□□□□□ -0.29
Usp48-201ENSMUST00000055131 Cox7b2Q9D2H1 82 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 89.4 ms