RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gphb5Q812B2 130 aa11.08□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Dkk4Q8VEJ3 221 aa11.08□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Prrc2cQ3TLH4 2846 aaKnown RBP11.08□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Ankrd39Q9D2X0 183 aa11.08□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Xlr5cQ9JJR2 179 aa11.08□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Ncor1Q60974 2453 aa11.08□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 LeprotO89013 131 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Ube2e1P52482 193 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 1500011B03RikQ3TTH7 73 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Ighv3-8A0A075B5T0 131 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Lect2O88803 151 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Prr3Q811B5 190 aaKnown RBP11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Mrpl35Q9CQL6 188 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Higd1aQ9JLR9 95 aa11.07□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Ighv1-5A0A0A6YWG2 117 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 FcorP0DJI6 106 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Edn3P48299 214 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm21748Q3UE70 102 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Mzt1Q8BUR9 78 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Mettl26Q9DCS2 204 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm6793B2RXM2 351 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 P01750 117 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 P84751 237 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Cyyr1Q8VIH7 165 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Mpv17l2Q8VIK2 200 aa11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 DspE9Q557 2883 aaKnown RBP11.06□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Scgb1b2O35176 93 aa11.05□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Psmb8P28063 276 aa11.05□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm867A0A1W2P7T4 151 aa11.05□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm10251J3QPM5 127 aa11.05□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Ins2P01326 110 aa11.05□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Tmem263Q9DAM7 115 aa11.05□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Arhgap32Q811P8 2089 aa11.04□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm17732E9Q5I2 61 aa11.04□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 LhbO09108 141 aa11.04□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 C1qcQ02105 246 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Defb20Q30KP3 96 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm17334Q8C6U3 126 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Rasl11bQ922H7 247 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Zc2hc1bQ9D534 172 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Tcte2E9PY37 120 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Atp5g3P56384 141 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Gm10735Q3US96 136 aa11.03□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 Sdk1Q3UH53 2193 aa11.02□□□□□ -0.64
Ushbp1-201ENSMUST00000049184 CrebbpP45481 2441 aa11.02□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Smim20D3Z7Q2 69 aa11.02□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Rbmy1bQ60990 380 aa11.02□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Wdr38Q9D994 303 aa11.02□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm9970F6ZED4 185 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Atp5eP56382 52 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ube2wQ8VDW4 151 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Mfap4Q9D1H9 257 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm20499D3Z4G5 72 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm9936Q8C864 160 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ndufb4Q9CQC7 129 aa11.01□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ighv1-50A0A075B5W1 117 aa11□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Trbv16A0A0B4J1H3 115 aa11□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ighv1-64A0A075B5X3 117 aa11□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ighv1-85A0A075B5Y6 117 aa11□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Pglyrp1O88593 182 aa11□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 P01726 129 aa10.99□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Mob4Q6PEB6 225 aa10.99□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm26661M0QWV4 156 aa10.99□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 A530064D06RikQ8BNV8 229 aa10.99□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 March3Q8BRX9 218 aa10.99□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm29423A0A087WRM1 55 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm904Q3V2L5 102 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Cfap126Q6P8X9 189 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Prr9Q8BV84 116 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Pgpep1lQ9CWB5 130 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Zfhx3Q61329 3726 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm3285A0A1W2P7U0 201 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ly6gP35461 111 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Fam19a4Q7TPG5 135 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 BB014433Q8C5R5 389 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Spink10Q8CAC8 162 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Cep250Q60952 2414 aa10.98□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Igkv4-69A0A0B4J1I6 116 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm15557A6PWY0 234 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Gm10767Q3TQP0 103 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Trav7-6A0A075B640 112 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ighv1-52A0A0A6YXC3 117 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 PkigO70139 76 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 P01820 115 aa10.97□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 Ighv1-12A0A0A6YXJ9 117 aa10.96□□□□□ -0.65
Ushbp1-201ENSMUST00000049184 TtrP07309 147 aa10.96□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Trav6-4A0A075B6B4 115 aa10.95□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 CenpwQ3URR0 86 aa10.95□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Defa26Q3L180 93 aa10.95□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Dopey2Q3UHQ6 2295 aa10.94□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Trank1Q8BV79 2999 aa10.94□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Morn3Q8C5T4 241 aa10.94□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 4930442H23RikQ9D5G7 103 aa10.94□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Gm10521E9PZK0 135 aa10.94□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Foxc1Q61572 553 aa10.94□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Sptbn1Q62261 2363 aaKnown RBP10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Trav4d-3A0A075B625 110 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Igkv4-62A0A0G2JDW9 117 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Ifitm1Q9D103 106 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 1700067P10RikG3X8U2 183 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 1117.6 ms