RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Gm17324Q8C6J8 137 aa10.55□□□□□ -0.72
Notch1-201ENSMUST00000028288 SelenowP63300 88 aa10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 Zfyve26Q5DU37 2529 aa10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 Igkv4-58A0A0G2JGI6 119 aa10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 Cox17P56394 63 aa10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 Tln1P26039 2541 aaKnown RBP10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 P01837 106 aa10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 Prh1P05142 261 aa10.54□□□□□ -0.72
Notch1-201ENSMUST00000028288 Nxph4G3X9N5 304 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 Gp9O88186 177 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 Wfdc11A2A5H7 82 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 P04942 107 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 Abca2P41234 2434 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 Cox7cP17665 63 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 Oxld1Q9CR10 201 aa10.53□□□□□ -0.72
Notch1-201ENSMUST00000028288 Trbv13-1A0A0B4J1P8 112 aa10.52□□□□□ -0.72
Notch1-201ENSMUST00000028288 Luzp4B1AV09 449 aa10.52□□□□□ -0.72
Notch1-201ENSMUST00000028288 Gm15127B1AVZ5 449 aa10.52□□□□□ -0.72
Notch1-201ENSMUST00000028288 Gm15107B1B0X0 449 aa10.52□□□□□ -0.72
Notch1-201ENSMUST00000028288 Gm15085Q62012 449 aa10.52□□□□□ -0.72
Notch1-201ENSMUST00000028288 Hcfc1Q61191 2045 aaKnown RBP10.52□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gata1P17679 413 aa10.52□□□□□ -0.73
Notch1-201ENSMUST00000028288 Ccl24Q9JKC0 119 aa10.52□□□□□ -0.73
Notch1-201ENSMUST00000028288 Nbl1Q61477 178 aa10.52□□□□□ -0.73
Notch1-201ENSMUST00000028288 Dazap2Q9DCP9 168 aa10.52□□□□□ -0.73
Notch1-201ENSMUST00000028288 Lst1O08843 95 aa10.51□□□□□ -0.73
Notch1-201ENSMUST00000028288 Wfdc15bQ9JHY4 80 aa10.51□□□□□ -0.73
Notch1-201ENSMUST00000028288 GfyJ3KML8 504 aa10.51□□□□□ -0.73
Notch1-201ENSMUST00000028288 Hoxb4P10284 250 aa10.51□□□□□ -0.73
Notch1-201ENSMUST00000028288 Ndufa1O35683 70 aa10.51□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm9936Q8C864 160 aa10.51□□□□□ -0.73
Notch1-201ENSMUST00000028288 Plscr4P58196 326 aa10.5□□□□□ -0.73
Notch1-201ENSMUST00000028288 Foxi2Q3I5G5 311 aa10.5□□□□□ -0.73
Notch1-201ENSMUST00000028288 Lyrm9Q3UN90 78 aa10.5□□□□□ -0.73
Notch1-201ENSMUST00000028288 MsmpB1AWI6 139 aa10.5□□□□□ -0.73
Notch1-201ENSMUST00000028288 Cdpf1Q8R3A2 119 aa10.5□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm9949Q8C9F4 104 aa10.5□□□□□ -0.73
Notch1-201ENSMUST00000028288 PemtQ61907 199 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Pglyrp1O88593 182 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Trav4-3A0A0B4J1K1 110 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Erdr1J3QMM0 206 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Ang4Q3TMQ6 144 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm10295Q8CCF3 114 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Fam241bQ9D882 120 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Igkv1-122A0A140T8M9 119 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Rpl39P62892 51 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Glrp1E9Q9S8 174 aa10.49□□□□□ -0.73
Notch1-201ENSMUST00000028288 Col4a4Q9QZR9 1682 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 OdaphJ3QNT8 126 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 Klk11Q9QYN3 276 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 Trav9d-3A0A075B695 113 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 P01756 117 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 P01757 117 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 NpyP57774 97 aa10.48□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm10553J3QPF1 123 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 Ighv13-2A0A0A6YWN3 119 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm21994F6T2D2 329 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm19684G3UZ45 117 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 Rbm3O89086 153 aaKnown RBP10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 Znf672Q99LH4 468 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 9930022D16RikQ8BG27 128 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 P01750 117 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 Ighv1-52A0A0A6YXC3 117 aa10.47□□□□□ -0.73
Notch1-201ENSMUST00000028288 MifP34884 115 aaKnown RBP10.46□□□□□ -0.73
Notch1-201ENSMUST00000028288 Mrpl35Q9CQL6 188 aa10.46□□□□□ -0.73
Notch1-201ENSMUST00000028288 1500011B03RikQ3TTH7 73 aa10.46□□□□□ -0.73
Notch1-201ENSMUST00000028288 Trav9n-2A0A0G2JDP3 113 aa10.46□□□□□ -0.73
Notch1-201ENSMUST00000028288 Gm20708H3BKF4 155 aa10.46□□□□□ -0.73
Notch1-201ENSMUST00000028288 Ighv1-12A0A0A6YXJ9 117 aa10.46□□□□□ -0.74
Notch1-201ENSMUST00000028288 PrcdQ00LT2 53 aa10.46□□□□□ -0.74
Notch1-201ENSMUST00000028288 Tmem258P61166 79 aa10.46□□□□□ -0.74
Notch1-201ENSMUST00000028288 9230109A22RikQ8BHE6 111 aa10.46□□□□□ -0.74
Notch1-201ENSMUST00000028288 UrahQ9CRB3 118 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 Trav7-6A0A075B640 112 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 4930546C10RikE9Q4Y3 121 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 Q99M08 65 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 Ndufb4Q9CQC7 129 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 Col5a1O88207 1838 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 C920008G01RikA0A0B4J1N1 112 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 Spink8Q09TK9 105 aa10.45□□□□□ -0.74
Notch1-201ENSMUST00000028288 Iglc1A0A0G2JE99 106 aa10.44□□□□□ -0.74
Notch1-201ENSMUST00000028288 P01843 105 aa10.44□□□□□ -0.74
Notch1-201ENSMUST00000028288 Bub3Q9WVA3 326 aa10.44□□□□□ -0.74
Notch1-201ENSMUST00000028288 Timm17aQ9Z0V8 171 aa10.44□□□□□ -0.74
Notch1-201ENSMUST00000028288 Brk1Q91VR8 75 aa10.44□□□□□ -0.74
Notch1-201ENSMUST00000028288 Vsig4F6TUL9 280 aa10.43□□□□□ -0.74
Notch1-201ENSMUST00000028288 Ang3P97802 145 aa10.43□□□□□ -0.74
Notch1-201ENSMUST00000028288 Gm26602M0QWA4 95 aa10.43□□□□□ -0.74
Notch1-201ENSMUST00000028288 Atp6v0e2Q91XE7 81 aa10.43□□□□□ -0.74
Notch1-201ENSMUST00000028288 P01753 117 aa10.43□□□□□ -0.74
Notch1-201ENSMUST00000028288 Mlst8Q9DCJ1 326 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 7420426K07RikQ3UX66 186 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 CstadQ9D245 104 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 Tm2d1Q99MB3 208 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 Trav4d-3A0A075B625 110 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 Gm15217A2CG07 155 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 Odf1Q61999 247 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 Gm4861Q8C5A4 106 aa10.42□□□□□ -0.74
Notch1-201ENSMUST00000028288 Ube2bP63147 152 aa10.41□□□□□ -0.74
Notch1-201ENSMUST00000028288 Igkv8-26A0A075B5N5 123 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms