RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 LrbaQ9ESE1 2856 aa12.28□□□□□ -0.44
Trim8-201ENSMUST00000026008 Spag11Q8K4N2 71 aa12.28□□□□□ -0.44
Trim8-201ENSMUST00000026008 Uqcrfs1Q9CR68 274 aa12.28□□□□□ -0.44
Trim8-201ENSMUST00000026008 Vamp8O70404 101 aa12.27□□□□□ -0.44
Trim8-201ENSMUST00000026008 Prss29Q99MS4 279 aa12.27□□□□□ -0.44
Trim8-201ENSMUST00000026008 AamdcQ8R0P4 122 aa12.27□□□□□ -0.45
Trim8-201ENSMUST00000026008 Pgpep1Q9ESW8 209 aa12.27□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ighv1-64A0A075B5X3 117 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ighv1-50A0A075B5W1 117 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 Gm1553Q66VB7 94 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 AY761184Q9D848 116 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 P04219 140 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 C1qcQ02105 246 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 Gm21370Q3T9V6 190 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 Gm9961Q8BNV2 113 aa12.26□□□□□ -0.45
Trim8-201ENSMUST00000026008 PlaurP35456 327 aa12.25□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ighv1-75A0A075B5Y2 117 aa12.25□□□□□ -0.45
Trim8-201ENSMUST00000026008 Mllt11P97783 90 aa12.25□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ighv3-3A0A0A6YWL2 116 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Sprr3O09116 238 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Usmg5Q78IK2 58 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Srsf9Q9D0B0 222 aaKnown RBP12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Esp4A8R0T8 117 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Insl3O09107 122 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 P01726 129 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Pla2g2aP31482 146 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 Q5BN45 167 aa12.24□□□□□ -0.45
Trim8-201ENSMUST00000026008 P01812 117 aa12.23□□□□□ -0.45
Trim8-201ENSMUST00000026008 SrarpQ3ULG3 163 aa12.23□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ss18Q62280 418 aa12.23□□□□□ -0.45
Trim8-201ENSMUST00000026008 Lgals6O54891 301 aa12.23□□□□□ -0.45
Trim8-201ENSMUST00000026008 Foxi2Q3I5G5 311 aa12.23□□□□□ -0.45
Trim8-201ENSMUST00000026008 Nav3Q80TN7 2359 aa12.23□□□□□ -0.45
Trim8-201ENSMUST00000026008 Hoxd3P09027 433 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ndufb4Q9CQC7 129 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Iah1Q9DB29 249 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Notch3Q61982 2318 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Tep1P97499 2629 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Gm29666A0A087WQ99 126 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ighv1-12A0A0A6YXJ9 117 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Rpl36-ps4A0A140T8U4 117 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Ovol2Q8CIV7 274 aa12.22□□□□□ -0.45
Trim8-201ENSMUST00000026008 Klk7Q91VE3 249 aa12.21□□□□□ -0.45
Trim8-201ENSMUST00000026008 Gm2564F6Z9S8 108 aa12.21□□□□□ -0.46
Trim8-201ENSMUST00000026008 Ccl25O35903 144 aa12.21□□□□□ -0.46
Trim8-201ENSMUST00000026008 Cd69P37217 199 aa12.21□□□□□ -0.46
Trim8-201ENSMUST00000026008 NrepQ07475 68 aa12.2□□□□□ -0.46
Trim8-201ENSMUST00000026008 Atp6v0bQ91V37 205 aa12.2□□□□□ -0.46
Trim8-201ENSMUST00000026008 Ighv12-3A0A075B5T1 117 aa12.2□□□□□ -0.46
Trim8-201ENSMUST00000026008 Tnfrsf23Q9ER63 176 aa12.2□□□□□ -0.46
Trim8-201ENSMUST00000026008 Defb45Q3V490 66 aa12.19□□□□□ -0.46
Trim8-201ENSMUST00000026008 Nat8b-psE0CYC6 232 aa12.19□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm17732E9Q5I2 61 aa12.19□□□□□ -0.46
Trim8-201ENSMUST00000026008 F11rO88792 300 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Celsr2Q9R0M0 2920 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm9925F6T2U3 160 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Sigmar1O55242 223 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 1500011B03RikQ3TTH7 73 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Polr2kQ63871 58 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm10295Q8CCF3 114 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 LbhQ9CX60 105 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Triap1Q9D8Z2 76 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm28269A0A087WSG3 125 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Igkv4-69A0A0B4J1I6 116 aa12.18□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gphb5Q812B2 130 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 Klk5Q9D140 293 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 Lyzl4Q9D925 145 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 OtogO55225 2910 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 Wfdc15aQ8BH89 80 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 Q9D8Q6 235 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 Clec5aQ9R007 190 aa12.17□□□□□ -0.46
Trim8-201ENSMUST00000026008 Ighv1-58A0A075B5W9 117 aa12.16□□□□□ -0.46
Trim8-201ENSMUST00000026008 Rab37Q9JKM7 223 aa12.16□□□□□ -0.46
Trim8-201ENSMUST00000026008 Cysltr1Q99JA4 352 aa12.16□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm35549A0A0N4SUS7 141 aa12.16□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm45785A0A1B0GT05 94 aa12.16□□□□□ -0.46
Trim8-201ENSMUST00000026008 Gm10226O88253 85 aa12.16□□□□□ -0.46
Trim8-201ENSMUST00000026008 Trav9-2A0A075B647 113 aa12.15□□□□□ -0.46
Trim8-201ENSMUST00000026008 Trav9-4A0A0B4J1K2 113 aa12.15□□□□□ -0.46
Trim8-201ENSMUST00000026008 Tspan13Q9D8C2 204 aa12.15□□□□□ -0.46
Trim8-201ENSMUST00000026008 P01811 117 aa12.15□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv1-66A0A075B5X5 117 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 OdaphJ3QNT8 126 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 Snrpd3P62320 126 aaKnown RBP12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv2-7A0A075B5Q8 116 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 Esp24A8R0V6 68 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 FcorP0DJI6 106 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 BC106179Q8C9L1 186 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gemin7Q9CWY4 129 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 Dpm2Q9Z324 84 aa12.14□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv14-1A0A075B5R4 117 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 Lrcol1Q3URS3 161 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 Higd1aQ9JLR9 95 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 TrrapQ80YV3 2565 aaKnown RBP12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 4930596D02RikQ3V0H9 216 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 Nf1Q04690 2841 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm21994F6T2D2 329 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm37988J3QM41 62 aa12.13□□□□□ -0.47
Trim8-201ENSMUST00000026008 Hivep2Q3UHF7 2430 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 LystP97412 3788 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms