RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Snai3Q9QY31 287 aa9.71□□□□□ -0.85
Msh6-201ENSMUST00000005503 Rev3lQ61493 3122 aa9.71□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ighv1-50A0A075B5W1 117 aa9.71□□□□□ -0.86
Msh6-201ENSMUST00000005503 P01837 106 aa9.71□□□□□ -0.86
Msh6-201ENSMUST00000005503 Rnf185Q91YT2 192 aa9.71□□□□□ -0.86
Msh6-201ENSMUST00000005503 Setd2E9Q5F9 2537 aa9.71□□□□□ -0.86
Msh6-201ENSMUST00000005503 Tmem40Q4FJU9 225 aa9.7□□□□□ -0.86
Msh6-201ENSMUST00000005503 Defa23Q5G866 93 aa9.7□□□□□ -0.86
Msh6-201ENSMUST00000005503 Odf3Q920N1 254 aa9.7□□□□□ -0.86
Msh6-201ENSMUST00000005503 Hbb-b2P02089 147 aa9.7□□□□□ -0.86
Msh6-201ENSMUST00000005503 A530064D06RikQ8BNV8 229 aa9.7□□□□□ -0.86
Msh6-201ENSMUST00000005503 Obox8V9GWY9 217 aa9.7□□□□□ -0.86
Msh6-201ENSMUST00000005503 Defa7P50705 93 aa9.69□□□□□ -0.86
Msh6-201ENSMUST00000005503 Pfn2Q9JJV2 140 aa9.69□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm1968Q3T9I3 115 aa9.69□□□□□ -0.86
Msh6-201ENSMUST00000005503 Defa25Q5G864 92 aa9.69□□□□□ -0.86
Msh6-201ENSMUST00000005503 Fam19a4Q7TPG5 135 aa9.69□□□□□ -0.86
Msh6-201ENSMUST00000005503 MtorQ9JLN9 2549 aa9.69□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ighv1-49A0A0A6YWX2 117 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Mpv17l2Q8VIK2 200 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Tomm7Q9D173 55 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Triap1Q9D8Z2 76 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 HampQ9EQ21 83 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ighv3-4A0A0A6YXF1 117 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Cd27P41272 250 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gata4Q08369 441 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm16223Q8CBM3 117 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Chchd5Q9CQP3 110 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Cryba4Q9JJV0 196 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Igkv4-70A0A0B4J1I5 116 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Zfand3Q497H0 227 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Rbmy1bQ60990 380 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Prss58Q8BW11 241 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm14137Q8CE97 175 aa9.68□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm7257D3YX25 99 aa9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm20481G3UXK4 153 aa9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ighv1-12A0A0A6YXJ9 117 aa9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ifi27l2aQ8R412 90 aa9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 Tspan13Q9D8C2 204 aa9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 Klk1b4P00757 256 aa9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 Rpl36aP83882 106 aaKnown RBP9.67□□□□□ -0.86
Msh6-201ENSMUST00000005503 P01747 120 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 P01753 117 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Fhl1P97447 280 aaKnown RBP9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Trav9-2A0A075B647 113 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Trav9-4A0A0B4J1K2 113 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm20499D3Z4G5 72 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm7102J3QQ10 178 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm26566Q8CAC1 153 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Synj2bpQ9D6K5 145 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ndufs7Q9DC70 224 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Trav13d-1A0A075B606 110 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Edn3P48299 214 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Spink12Q9D256 87 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Tmem263Q9DAM7 115 aa9.66□□□□□ -0.86
Msh6-201ENSMUST00000005503 Trav7-6A0A075B640 112 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Igkv4-74A0A0B4J1I3 119 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Ly86O88188 162 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Mapk1ip1lQ8BH93 242 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Reg3gO09049 174 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Defa20Q45VN2 95 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Igkv4-57A0A0A6YYE7 117 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm15557A6PWY0 234 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Gm815Q3UWS2 115 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 H1fxQ80ZM5 188 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 Mrpl35Q9CQL6 188 aa9.65□□□□□ -0.86
Msh6-201ENSMUST00000005503 FryE9Q8I9 3020 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 Trbv30A0A0B4J1P1 111 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 Gatd1Q8BFQ8 220 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 Celsr3Q91ZI0 3301 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 Rpl35aO55142 110 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 P01643 108 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 P06328 117 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 Q9CX25 107 aa9.64□□□□□ -0.87
Msh6-201ENSMUST00000005503 Ndufb4Q9CQC7 129 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Abca12E9Q876 2595 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Myo18bE9PV66 2605 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Ighv3-1A0A075B5S6 116 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Gm7075D3Z497 112 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Hist1h4aP62806 103 aaKnown RBP9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 E130116L18RikQ8BMV6 101 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Gm10295Q8CCF3 114 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Ighv1-53A0A075B5W3 117 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Defa-rs2P17534 91 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 1500011B03RikQ3TTH7 73 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Lyzl4Q9D925 145 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Frem2Q6NVD0 3160 aa9.63□□□□□ -0.87
Msh6-201ENSMUST00000005503 Ighv1-58A0A075B5W9 117 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 Trav9n-2A0A0G2JDP3 113 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 B430305J03RikQ8BQQ8 176 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 AW146154Q3TPQ7 468 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 LeprotO89013 131 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 Gm904Q3V2L5 102 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 Defb29Q8BGW9 78 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 Ss18l2Q9D174 77 aa9.62□□□□□ -0.87
Msh6-201ENSMUST00000005503 Brca2P97929 3329 aa9.61□□□□□ -0.87
Msh6-201ENSMUST00000005503 Trav9d-4A0A0G2JG37 103 aa9.61□□□□□ -0.87
Msh6-201ENSMUST00000005503 TshbP12656 138 aa9.61□□□□□ -0.87
Msh6-201ENSMUST00000005503 Ighv1-82A0A0G2JEU7 117 aa9.61□□□□□ -0.87
Msh6-201ENSMUST00000005503 Nsun4C4P6S0 806 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms