RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Atg2aQ6P4T0 1914 aa9.68□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Gm20730A0A075B5J6 119 aa9.68□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Acyp1P56376 99 aa9.68□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Foxi2Q3I5G5 311 aa9.68□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Gm10295Q8CCF3 114 aa9.68□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Atp6v0e2Q91XE7 81 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Spink8Q09TK9 105 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Ndufb4Q9CQC7 129 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Bub3Q9WVA3 326 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 P01753 117 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 P04943 107 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Trbv16A0A0B4J1H3 115 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 E030018B13RikJ3QMS9 113 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Dmrtc1c1Q9D410 238 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Akap6E9Q9K8 2307 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Asxl3Q8C4A5 2259 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 PoleQ9WVF7 2283 aa9.67□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Obsl1D3YYU8 1804 aaKnown RBP9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Gm19684G3UZ45 117 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Defb47Q30KN1 79 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Zmat4Q8BZ94 229 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Tm2d2Q8R0I4 213 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Trav9-2A0A075B647 113 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Trav9-4A0A0B4J1K2 113 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Gm12353A2AGJ4 60 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Spink10Q8CAC8 162 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Pkd1l3Q2EG98 2201 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Igkv8-26A0A075B5N5 123 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Dock9Q8BIK4 2055 aa9.66□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Trav9d-3A0A075B695 113 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 9430069I07RikQ9CX21 111 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Ahctf1Q8CJF7 2243 aaKnown RBP9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Ighv3-1A0A075B5S6 116 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Atp5eP56382 52 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Atp5g3P56384 141 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Tmem223Q9CQE2 199 aaKnown RBP9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Atp5g1Q9CR84 136 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 7420426K07RikQ3UX66 186 aa9.65□□□□□ -0.86
Ssh1-202ENSMUST00000112298 Gm17455G3UW87 128 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Trav9n-2A0A0G2JDP3 113 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Iglc1A0A0G2JE99 106 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 P01843 105 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 9930022D16RikQ8BG27 128 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Ramp1Q9WTJ5 148 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Dock7Q8R1A4 2130 aaKnown RBP9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm20726G3UX18 150 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Nxph4G3X9N5 304 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Nbl1Q61477 178 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Igkv1-122A0A140T8M9 119 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 P04944 107 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Ucn2Q99ML8 113 aa9.64□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Tln2Q71LX4 2375 aa9.63□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Bdp1Q571C7 2467 aa9.63□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Hoxb4P10284 250 aa9.63□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Trav11A0A0B4J1J9 114 aa9.63□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Foxc1Q61572 553 aa9.63□□□□□ -0.87
Ssh1-202ENSMUST00000112298 AcacaQ5SWU9 2345 aa9.63□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm15091B1AZM2 449 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm10553J3QPF1 123 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Obox8V9GWY9 217 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 C920008G01RikA0A0B4J1N1 112 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 P01643 108 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 9230109A22RikQ8BHE6 111 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm17324Q8C6J8 137 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Egr2P08152 470 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 AngP21570 145 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Cox7b2Q9D2H1 82 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Spata25Q9DA57 226 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 1700010B08RikQ9DAI7 102 aa9.62□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm10251J3QPM5 127 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 PrcdQ00LT2 53 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm2916Q9D9B9 127 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Igkv8-18A0A0B4J1J3 123 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Prp2P05143 317 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Fhl1P97447 280 aaKnown RBP9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 MifP34884 115 aaKnown RBP9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Ighv1-53A0A075B5W3 117 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 P01745 121 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 P01748 117 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm8251F6VUT6 1994 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Pde6gP09174 87 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Ppp1r32Q148A4 427 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 B9d2Q3UK10 175 aa9.61□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm15093A2BI72 449 aa9.6□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm15097E9QA14 449 aa9.6□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Gm10518F6UQQ9 182 aa9.6□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Fam19a4Q7TPG5 135 aa9.6□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Znf672Q99LH4 468 aa9.6□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Spry4Q9WTP2 300 aa9.6□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Ang3P97802 145 aa9.59□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Mrpl35Q9CQL6 188 aa9.59□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Cox7a1P56392 80 aa9.59□□□□□ -0.87
Ssh1-202ENSMUST00000112298 Nckap5E9QAE1 1909 aa9.59□□□□□ -0.87
Ssh1-202ENSMUST00000112298 IgipA0A1B0GR74 53 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm26602M0QWA4 95 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Mrpl52Q9D0Y8 121 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Kif26aQ52KG5 1881 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 BikO70337 150 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 NpyP57774 97 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Mlst8Q9DCJ1 326 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 88.7 ms