RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Snrnp200Q6P4T2 2136 aaKnown RBP11.74□□□□□ -0.53
Shank1-202ENSMUST00000107935 Ndufs5Q99LY9 106 aa11.74□□□□□ -0.53
Shank1-202ENSMUST00000107935 Nop10Q9CQS2 64 aa11.74□□□□□ -0.53
Shank1-202ENSMUST00000107935 CtrlQ9ER05 264 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Rnf114Q9ET26 229 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Cela2aP05208 271 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Igkv8-26A0A075B5N5 123 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Klk12B2RVZ0 247 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Vpreb3D3Z6J4 130 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Ighv13-2A0A0A6YWN3 119 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Loxhd1C8YR32 2068 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Fer1l5P0DM40 2038 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Ralgapa1Q6GYP7 2035 aa11.73□□□□□ -0.53
Shank1-202ENSMUST00000107935 Gm12057A0A087WR21 115 aa11.72□□□□□ -0.53
Shank1-202ENSMUST00000107935 Rpl39lQ9CQD0 51 aa11.72□□□□□ -0.53
Shank1-202ENSMUST00000107935 Fam19a4Q7TPG5 135 aa11.72□□□□□ -0.53
Shank1-202ENSMUST00000107935 Gm10518F6UQQ9 182 aa11.71□□□□□ -0.53
Shank1-202ENSMUST00000107935 Wnk2Q3UH66 2149 aa11.71□□□□□ -0.53
Shank1-202ENSMUST00000107935 Gm17359A0A0G2JEB7 487 aa11.71□□□□□ -0.53
Shank1-202ENSMUST00000107935 CrygcQ61597 174 aa11.71□□□□□ -0.53
Shank1-202ENSMUST00000107935 Gm3618D3Z4P5 127 aa11.71□□□□□ -0.54
Shank1-202ENSMUST00000107935 Pde6gP09174 87 aa11.71□□□□□ -0.54
Shank1-202ENSMUST00000107935 Znf672Q99LH4 468 aa11.71□□□□□ -0.54
Shank1-202ENSMUST00000107935 P01750 117 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Q08AU9 97 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Gm10192Q3V0S1 108 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Iglv1A0A075B663 117 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 H2al1bA0A087WP11 105 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Trav13d-4A0A0G2JFX3 110 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Gm12353A2AGJ4 60 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Prh1P05142 261 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Klk9Q32M27 251 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Ighv2-6A0A075B6A7 116 aa11.7□□□□□ -0.54
Shank1-202ENSMUST00000107935 Sec61gP60060 68 aa11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 EnhoQ8K1D8 76 aa11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 MylkQ6PDN3 1941 aaKnown RBP11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 Plce1Q8K4S1 2282 aa11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 Alpk2Q91ZB0 2144 aa11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 Trav14-1A0A0G2JF94 121 aa11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 GfyJ3KML8 504 aa11.69□□□□□ -0.54
Shank1-202ENSMUST00000107935 Fam110aQ8R184 296 aa11.68□□□□□ -0.54
Shank1-202ENSMUST00000107935 Wdr38Q9D994 303 aa11.68□□□□□ -0.54
Shank1-202ENSMUST00000107935 Trav9d-3A0A075B695 113 aa11.68□□□□□ -0.54
Shank1-202ENSMUST00000107935 Rnf152Q8BG47 203 aa11.68□□□□□ -0.54
Shank1-202ENSMUST00000107935 Triap1Q9D8Z2 76 aa11.68□□□□□ -0.54
Shank1-202ENSMUST00000107935 Col11a1Q61245 1804 aa11.68□□□□□ -0.54
Shank1-202ENSMUST00000107935 Trav13-1A0A075B644 110 aa11.67□□□□□ -0.54
Shank1-202ENSMUST00000107935 P01630 113 aa11.67□□□□□ -0.54
Shank1-202ENSMUST00000107935 Apc2Q9Z1K7 2274 aa11.67□□□□□ -0.54
Shank1-202ENSMUST00000107935 Plxna3P70208 1872 aa11.67□□□□□ -0.54
Shank1-202ENSMUST00000107935 Ypel4Q65Z93 127 aa11.67□□□□□ -0.54
Shank1-202ENSMUST00000107935 B230359F08RikA0A0B4J1K3 109 aa11.67□□□□□ -0.54
Shank1-202ENSMUST00000107935 Loxl1P97873 607 aa11.66□□□□□ -0.54
Shank1-202ENSMUST00000107935 Tm2d2Q8R0I4 213 aa11.66□□□□□ -0.54
Shank1-202ENSMUST00000107935 P01674 108 aa11.66□□□□□ -0.54
Shank1-202ENSMUST00000107935 Serp2Q6TAW2 65 aa11.66□□□□□ -0.54
Shank1-202ENSMUST00000107935 Gm4861Q8C5A4 106 aa11.66□□□□□ -0.54
Shank1-202ENSMUST00000107935 Gm37389A0A0A6YW05 95 aa11.66□□□□□ -0.54
Shank1-202ENSMUST00000107935 RttnQ8R4Y8 2226 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Igkv8-18A0A0B4J1J3 123 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Odf1Q61999 247 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Snai3Q9QY31 287 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Prr15lQ8JZM2 100 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Trav9n-2A0A0G2JDP3 113 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Ank3G5E8K5 1961 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Ighv1-52A0A0A6YXC3 117 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Mlst8Q9DCJ1 326 aa11.65□□□□□ -0.54
Shank1-202ENSMUST00000107935 Trav13-2A0A075B649 110 aa11.65□□□□□ -0.55
Shank1-202ENSMUST00000107935 Igkv1-88A0A140T8N1 120 aa11.65□□□□□ -0.55
Shank1-202ENSMUST00000107935 Gm5468Q8C3D3 155 aa11.65□□□□□ -0.55
Shank1-202ENSMUST00000107935 Urb1Q571H0 2274 aaKnown RBP11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Pglyrp1O88593 182 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Odf3Q920N1 254 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 PtprfA2A8L5 1898 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Trav13-4-dv7A0A075B6C2 110 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Sh2d1aO88890 126 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 P01753 117 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 P04940 107 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 P04941 107 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Cd27P41272 250 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Igkv3-5A0A140T8M6 119 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 BtcQ05928 177 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 H2al1aQ5M8Q2 105 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 H2al1eQ810S6 105 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Timm17bQ9Z0V7 172 aa11.64□□□□□ -0.55
Shank1-202ENSMUST00000107935 Trav9-2A0A075B647 113 aa11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 Trav9-4A0A0B4J1K2 113 aa11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 GrnP28798 589 aaKnown RBP11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 Fxyd5P97808 178 aa11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 Rpl18aP62717 176 aaKnown RBP11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 9530003J23RikQ8BM26 151 aa11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 Parp4E9PYK3 1969 aa11.63□□□□□ -0.55
Shank1-202ENSMUST00000107935 Cox8cA6H666 72 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 3110082J24RikF6Z6Z2 108 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 RlfA2A7F4 1918 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Mapk1ip1lQ8BH93 242 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Klk11Q9QYN3 276 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Ighv3-4A0A0A6YXF1 117 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Ighv8-5A0A0A6YY60 119 aa11.62□□□□□ -0.55
Shank1-202ENSMUST00000107935 Ndufb1P0DN34 57 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms