RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 RhohQ9D3G9 191 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Hcfc2Q9D968 241 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Fam216aQ9DB54 251 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Arhgap32Q811P8 2089 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Esp38A8R0X1 80 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm765B2RVL9 189 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ccl17F6R5P4 103 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Fam19a2Q7TPG7 131 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm5148Q8BGG2 154 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Cphx2Q8BX39 182 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Mrpl36Q99N90 102 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ighv8-6A0A0A6YXA3 118 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 4930447F04RikA2AFR2 126 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 PrlhG3UWC3 86 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 AngP21570 145 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Tex26Q0VB26 296 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Q24JP4 165 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm9944Q8C559 102 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 EpcamQ99JW5 315 aa6.44□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm5157A0A087WRH8 301 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Defa34D3Z0J0 93 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Defa37K9J724 93 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Defa5P28312 93 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Rnf152Q8BG47 203 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Tmem140Q8BGY5 185 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gkn1Q9CR36 201 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Mapk1ip1Q9D7G9 263 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Tax1bp3Q9DBG9 124 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Notch3Q61982 2318 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 P01741 114 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 P01786 117 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 P01791 123 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Olfr322Q5NCC8 327 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Foxi1Q922I5 372 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 Cd164l2Q9D6W7 172 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 PdfS4R2K0 231 aa6.43□□□□□ -1.38
Trim39-201ENSMUST00000042717 H2-DMb1P35737 261 aa6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ly6g5bQ8K1T4 194 aa6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Chchd1Q9CQA6 118 aa6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Mrpl53Q9D1H8 118 aaKnown RBP6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ighv1-23A0A0A6YVW3 117 aa6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm45623A0A1B0GSF6 103 aa6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Sigmar1O55242 223 aa6.42□□□□□ -1.38
Trim39-201ENSMUST00000042717 Trbv14A0A140T8L9 115 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Vmn1r149E9PWL6 307 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Vmn1r101E9Q365 307 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Ndufa4l2Q4FZG9 87 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Il19Q8CJ70 176 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 RnasekQ8K3C0 98 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Olfr984Q8VFN1 314 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gtsf1lQ9CWD0 151 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Q9D727 114 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Igkv4-62A0A0G2JDW9 117 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Emp2O88662 172 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 P06328 117 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 MdfiP70331 251 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Khdc1cQ4KL78 166 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gng7Q61016 68 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Nhlrc1Q8BR37 401 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Trav14-3A0A075B607 120 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 1520401A03RikA0A0J9YVH6 598 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Omt2bD3YX29 119 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Defa24Q5G865 93 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 4930564D02RikQ9D4S4 103 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Q9DAA3 117 aa6.41□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm9376G3UW68 176 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm7138L7N2C3 230 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 Il22ra1Q80XZ4 581 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 Pam16Q9CQV1 125 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 8030423J24RikQ9CX45 142 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 Pgpep1Q9ESW8 209 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 Nudt3Q9JI46 168 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 Gm3238W4VSP7 230 aa6.4□□□□□ -1.38
Trim39-201ENSMUST00000042717 P01753 117 aa6.4□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm10842Q3U587 122 aa6.4□□□□□ -1.39
Trim39-201ENSMUST00000042717 Psmb11Q8BG41 302 aa6.4□□□□□ -1.39
Trim39-201ENSMUST00000042717 Mrpl32Q9DCI9 187 aaKnown RBP6.4□□□□□ -1.39
Trim39-201ENSMUST00000042717 Clec5aQ9R007 190 aa6.4□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm36176A0A1W2P8D5 158 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 TshbP12656 138 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Defb10Q8R2I8 73 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Tctex1d2Q9CQ66 144 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 PpbpQ9EQI5 113 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 CcsQ9WU84 274 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Igkv4-74A0A0B4J1I3 119 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 H2al2bA9Z055 111 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Gm5426J3QNM7 103 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Ormdl3Q9CPZ6 153 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Q9D131 166 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Lamtor2Q9JHS3 125 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Mc5rP41149 325 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 C1qcQ02105 246 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 7420426K07RikQ3UX66 186 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Mrpl35Q9CQL6 188 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Fmc1Q9CR13 113 aa6.39□□□□□ -1.39
Trim39-201ENSMUST00000042717 Srrm2Q8BTI8 2703 aaKnown RBP6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Ighv1-75A0A075B5Y2 117 aa6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Ighv3-3A0A0A6YWL2 116 aa6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Crip3Q6Q6R3 243 aa6.38□□□□□ -1.39
Trim39-201ENSMUST00000042717 Rs1Q9Z1L4 224 aa6.38□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 87.8 ms