RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Plac1Q9JI83 173 aa11.29□□□□□ -0.6
Nup54-201ENSMUST00000038514 Zfhx3Q61329 3726 aa11.29□□□□□ -0.6
Nup54-201ENSMUST00000038514 Defa24Q5G865 93 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 Trav7-2Q5R1I3 112 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 Rasl11bQ922H7 247 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 Ighv8-12A0A0G2JDE1 119 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 Defa-rs7P50715 91 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 MdfiP70331 251 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 Tmem170bP86050 132 aa11.28□□□□□ -0.6
Nup54-201ENSMUST00000038514 Igkv4-74A0A0B4J1I3 119 aa11.27□□□□□ -0.6
Nup54-201ENSMUST00000038514 BatfO35284 125 aa11.27□□□□□ -0.6
Nup54-201ENSMUST00000038514 Cd69P37217 199 aa11.27□□□□□ -0.61
Nup54-201ENSMUST00000038514 Hist1h1tQ07133 208 aa11.27□□□□□ -0.61
Nup54-201ENSMUST00000038514 Pgpep1Q9ESW8 209 aa11.27□□□□□ -0.61
Nup54-201ENSMUST00000038514 P01750 117 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Q9D8Q6 235 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Rs1Q9Z1L4 224 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Rpl36-ps4A0A140T8U4 117 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Gm10271F6WY25 52 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ins2P01326 110 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Cela2aP05208 271 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 PolP10400 120 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 Pla2g2cP48076 150 aa11.26□□□□□ -0.61
Nup54-201ENSMUST00000038514 P06328 117 aa11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Egr2P08152 470 aa11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ube2d1P61080 147 aaKnown RBP11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Pcp4P63054 62 aa11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Tcf15Q60756 195 aa11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Sec16aA2AIX1 2377 aa11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Igkv4-69A0A0B4J1I6 116 aa11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Rpl32P62911 135 aaKnown RBP11.25□□□□□ -0.61
Nup54-201ENSMUST00000038514 Trbv13-1A0A0B4J1P8 112 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Gm42674D3YUT9 64 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 TgfaP48030 159 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 SrarpQ3ULG3 163 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 BC025920Q3US60 128 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Rpl11Q9CXW4 178 aaKnown RBP11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Spink12Q9D256 87 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ighv3-8A0A075B5T0 131 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Gm45717A0A1B0GT68 152 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Edn2P22389 175 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Pla2g2aP31482 146 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Znf580Q9DB38 172 aa11.24□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ighv1-64A0A075B5X3 117 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Defa3P28310 93 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Defa10P50708 93 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Defa15P50713 93 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Samd10Q7TST3 202 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Prss41Q920S2 322 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Tspan13Q9D8C2 204 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Iah1Q9DB29 249 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ighv1-66A0A075B5X5 117 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ighv8-5A0A0A6YY60 119 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Gm45753A0A1C7CYU8 86 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Polr2kQ63871 58 aa11.23□□□□□ -0.61
Nup54-201ENSMUST00000038514 Igkv2-137A0A0B4J1H6 120 aa11.22□□□□□ -0.61
Nup54-201ENSMUST00000038514 LhbO09108 141 aa11.22□□□□□ -0.61
Nup54-201ENSMUST00000038514 Trav3-1Q5R1I8 114 aa11.22□□□□□ -0.61
Nup54-201ENSMUST00000038514 Dpm2Q9Z324 84 aa11.22□□□□□ -0.61
Nup54-201ENSMUST00000038514 Ighv1-50A0A075B5W1 117 aa11.21□□□□□ -0.61
Nup54-201ENSMUST00000038514 Insl3O09107 122 aa11.21□□□□□ -0.61
Nup54-201ENSMUST00000038514 Rpl39P62892 51 aa11.21□□□□□ -0.61
Nup54-201ENSMUST00000038514 Foxi2Q3I5G5 311 aa11.21□□□□□ -0.61
Nup54-201ENSMUST00000038514 Klk5Q9D140 293 aa11.21□□□□□ -0.61
Nup54-201ENSMUST00000038514 Casp6O08738 276 aa11.21□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gemin7Q9CWY4 129 aa11.21□□□□□ -0.62
Nup54-201ENSMUST00000038514 Trav4n-4A0A075B615 110 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm21370Q3T9V6 190 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Trav2Q5R1I9 109 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 BC048562Q80ZQ7 204 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gphb5Q812B2 130 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Uqcrfs1Q9CR68 274 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 PmvkQ9D1G2 192 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Krtap26-1Q9D7N2 215 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Tcrg-C1A0A075B5Z0 172 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm10521E9PZK0 135 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Cited2O35740 269 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Ube2d3P61079 147 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Ube2d2P62838 147 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Med13lQ6JPI3 2207 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 Adgrg4B7ZCC9 3073 aa11.2□□□□□ -0.62
Nup54-201ENSMUST00000038514 1700067P10RikG3X8U2 183 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Ccl19O70460 108 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 1500011B03RikQ3TTH7 73 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm1553Q66VB7 94 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Cysltr1Q99JA4 352 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Ndufb4Q9CQC7 129 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 HilpdaQ9JLS0 64 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Trav6-4A0A075B6B4 115 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Atp6v0e2Q91XE7 81 aa11.19□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm2564F6Z9S8 108 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Sprr3O09116 238 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 P01896 185 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Klk7Q91VE3 249 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Foxi1Q922I5 372 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Srsf9Q9D0B0 222 aaKnown RBP11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Triap1Q9D8Z2 76 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Lyzl4Q9D925 145 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Tnfrsf23Q9ER63 176 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Sptbn1Q62261 2363 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms