RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Q4KKZ1 196 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ubr5Q80TP3 2792 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm9970F6ZED4 185 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Tcrg-C3L7N479 172 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 P03985 172 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Olfr313Q5NC55 308 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Igkv4-57-1A0A075B5M4 119 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Igkv2-137A0A0B4J1H6 120 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ighv8-12A0A0G2JDE1 119 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 P01747 120 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 SrarpQ3ULG3 163 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Prr3Q811B5 190 aaKnown RBP10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Sh3bgrl2Q8BG73 107 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Spata45Q9CVW4 97 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Tmem219Q9D123 240 aa10.16□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ighv1-82A0A0G2JEU7 117 aa10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 Defa26Q3L180 93 aa10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 Trav3-1Q5R1I8 114 aa10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 SonQ9QX47 2444 aaKnown RBP10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ighv1-80A0A075B5Y3 117 aa10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ube2e1P52482 193 aa10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 BC048562Q80ZQ7 204 aa10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 Rpl11Q9CXW4 178 aaKnown RBP10.15□□□□□ -0.78
Nup88-201ENSMUST00000035283 LrbaQ9ESE1 2856 aa10.15□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gm9195A0A140LHT4 2805 aa10.14□□□□□ -0.79
Nup88-201ENSMUST00000035283 NrepQ07475 68 aa10.14□□□□□ -0.79
Nup88-201ENSMUST00000035283 Dpm3Q9D1Q4 92 aa10.14□□□□□ -0.79
Nup88-201ENSMUST00000035283 Ighv3-8A0A075B5T0 131 aa10.14□□□□□ -0.79
Nup88-201ENSMUST00000035283 P01812 117 aa10.14□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gm10295Q8CCF3 114 aa10.14□□□□□ -0.79
Nup88-201ENSMUST00000035283 Tspan13Q9D8C2 204 aa10.13□□□□□ -0.79
Nup88-201ENSMUST00000035283 Cryba4Q9JJV0 196 aa10.13□□□□□ -0.79
Nup88-201ENSMUST00000035283 Igkv4-74A0A0B4J1I3 119 aa10.13□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gm10271F6WY25 52 aa10.13□□□□□ -0.79
Nup88-201ENSMUST00000035283 Rpl39P62892 51 aa10.13□□□□□ -0.79
Nup88-201ENSMUST00000035283 Arl3Q9WUL7 182 aa10.13□□□□□ -0.79
Nup88-201ENSMUST00000035283 Q9D8Q6 235 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Cspg4Q8VHY0 2327 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Col6a4A2AX52 2309 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Ube2d1P61080 147 aaKnown RBP10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 MdfiP70331 251 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Smr3aQ61900 147 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gpr82Q8BZR0 328 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Atp6v0bQ91V37 205 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Pgpep1lQ9CWB5 130 aa10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Srsf9Q9D0B0 222 aaKnown RBP10.12□□□□□ -0.79
Nup88-201ENSMUST00000035283 Tcrg-C1A0A075B5Z0 172 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 P01739 132 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Egr2P08152 470 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Foxi2Q3I5G5 311 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gm45785A0A1B0GT05 94 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Ccl19O70460 108 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gm1553Q66VB7 94 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Triap1Q9D8Z2 76 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Q9DAB9 146 aa10.11□□□□□ -0.79
Nup88-201ENSMUST00000035283 Hcfc1Q61191 2045 aaKnown RBP10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Hoxd3P09027 433 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Foxi1Q922I5 372 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Cdip1Q9DB75 208 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Clec5aQ9R007 190 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Dido1Q8C9B9 2256 aaKnown RBP10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Ighv14-1A0A075B5R4 117 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gm45717A0A1B0GT68 152 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Ovol2Q8CIV7 274 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 Cxcl14Q9WUQ5 99 aa10.1□□□□□ -0.79
Nup88-201ENSMUST00000035283 P01643 108 aa10.09□□□□□ -0.79
Nup88-201ENSMUST00000035283 P06328 117 aa10.09□□□□□ -0.79
Nup88-201ENSMUST00000035283 Gemin7Q9CWY4 129 aa10.09□□□□□ -0.79
Nup88-201ENSMUST00000035283 Ighv12-3A0A075B5T1 117 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 2310009B15RikA0A0A6YWI4 143 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ighv3-3A0A0A6YWL2 116 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gm15557A6PWY0 234 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Cks1bP61025 79 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Lmo4P61969 165 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ighv1-75A0A075B5Y2 117 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ighv8-5A0A0A6YY60 119 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Edn2P22389 175 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ube2d3P61079 147 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ube2d2P62838 147 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ubtd1Q91WB7 227 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Cysltr1Q99JA4 352 aa10.08□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gm2564F6Z9S8 108 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 LhbO09108 141 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Runx1Q03347 451 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Tcf15Q60756 195 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Prr9Q8BV84 116 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gm17334Q8C6U3 126 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 PmvkQ9D1G2 192 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Sptbn4E9PX29 2561 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 1700067P10RikG3X8U2 183 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Lgals6O54891 301 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 P01820 115 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gm9961Q8BNV2 113 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Rasl11bQ922H7 247 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Mettl26Q9DCS2 204 aa10.07□□□□□ -0.8
Nup88-201ENSMUST00000035283 Rpl36-ps4A0A140T8U4 117 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Lce6aD3YV94 81 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Nat8b-psE0CYC6 232 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Tcte2E9PY37 120 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gm10521E9PZK0 135 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 243.4 ms