RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR11, Length 258 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR11	snR11	BPL1	P48445	690 aa	Predicted RBP	4.24	□□□□□ -1.73
snR11	snR11	ATP23	P53722	227 aa		4.24	□□□□□ -1.73
snR11	snR11	VPS64	Q03944	604 aa		4.24	□□□□□ -1.73
snR11	snR11	ECM16	Q04217	1267 aa	Known RBP	4.24	□□□□□ -1.73
snR11	snR11	EIS1	Q05050	843 aa	Known RBP	4.24	□□□□□ -1.73
snR11	snR11	IRC3	Q06683	689 aa		4.24	□□□□□ -1.73
snR11	snR11	RRP43	P25359	394 aa	Predicted RBP	4.23	□□□□□ -1.73
snR11	snR11	FUI1	P38196	639 aa		4.23	□□□□□ -1.73
snR11	snR11	STT3	P39007	718 aa	Known RBP	4.23	□□□□□ -1.73
snR11	snR11	COG2	P53271	262 aa		4.23	□□□□□ -1.73
snR11	snR11	CRF1	Q04930	467 aa		4.23	□□□□□ -1.73
snR11	snR11	MLC2	Q06580	163 aa		4.23	□□□□□ -1.73
snR11	snR11	YER175W-A	Q8TGU4	54 aa		4.23	□□□□□ -1.73
snR11	snR11	GAL1	P04385	528 aa		4.22	□□□□□ -1.73
snR11	snR11	ATP4	P05626	244 aa		4.22	□□□□□ -1.73
snR11	snR11	BEM3	P32873	1128 aa		4.22	□□□□□ -1.73
snR11	snR11	YKL133C	P36066	463 aa		4.22	□□□□□ -1.73
snR11	snR11	LAS21	P40367	830 aa		4.22	□□□□□ -1.73
snR11	snR11	ULP2	P40537	1034 aa	Predicted RBP	4.22	□□□□□ -1.73
snR11	snR11	QRI7	P43122	407 aa		4.22	□□□□□ -1.73
snR11	snR11	ESF2	P53743	316 aa	Known RBP	4.22	□□□□□ -1.73
snR11	snR11	UBP16	Q02863	499 aa		4.22	□□□□□ -1.73
snR11	snR11	ORM2	Q06144	216 aa		4.22	□□□□□ -1.73
snR11	snR11	AIM6	Q07716	390 aa		4.22	□□□□□ -1.73
snR11	snR11	YDL242W	Q07746	117 aa		4.22	□□□□□ -1.73
snR11	snR11	CTT1	P06115	562 aa		4.21	□□□□□ -1.74
snR11	snR11	MSS18	P08593	268 aa		4.21	□□□□□ -1.74
snR11	snR11	SIR1	P21691	654 aa		4.21	□□□□□ -1.74
snR11	snR11	XBP1	P40489	647 aa		4.21	□□□□□ -1.74
snR11	snR11	NOP2	P40991	618 aa	Known RBP	4.21	□□□□□ -1.74
snR11	snR11	NMD5	P46970	1048 aa		4.21	□□□□□ -1.74
snR11	snR11	TEP1	P53916	434 aa		4.21	□□□□□ -1.74
snR11	snR11	MOT3	P54785	490 aa	Known RBP	4.21	□□□□□ -1.74
snR11	snR11	SVL3	Q03088	825 aa	Known RBP	4.21	□□□□□ -1.74
snR11	snR11	PIF1	P07271	859 aa		4.2	□□□□□ -1.74
snR11	snR11	MTG2	P38860	518 aa		4.2	□□□□□ -1.74
snR11	snR11	SAP1	P39955	897 aa	Known RBP	4.2	□□□□□ -1.74
snR11	snR11	RSC9	Q03124	581 aa		4.2	□□□□□ -1.74
snR11	snR11	RAD34	Q06665	692 aa		4.2	□□□□□ -1.74
snR11	snR11	AFT2	Q08957	416 aa		4.2	□□□□□ -1.74
snR11	snR11	SES1	P07284	462 aa	Known RBP	4.19	□□□□□ -1.74
snR11	snR11	TRX2	P22803	104 aa	Known RBP	4.19	□□□□□ -1.74
snR11	snR11	PTP2	P29461	750 aa		4.19	□□□□□ -1.74
snR11	snR11	KES1	P35844	434 aa	Known RBP	4.19	□□□□□ -1.74
snR11	snR11	APM3	P38153	483 aa		4.19	□□□□□ -1.74
snR11	snR11	ERC1	P38767	581 aa		4.19	□□□□□ -1.74
snR11	snR11	LNP1	P38878	278 aa		4.19	□□□□□ -1.74
snR11	snR11	CIR1	P42940	261 aa		4.19	□□□□□ -1.74
snR11	snR11	PLM2	Q04383	521 aa		4.19	□□□□□ -1.74
snR11	snR11	YML053C	Q04978	212 aa		4.19	□□□□□ -1.74
snR11	snR11	YDL121C	Q07541	149 aa		4.19	□□□□□ -1.74
snR11	snR11	ICL2	Q12031	575 aa		4.19	□□□□□ -1.74
snR11	snR11	PNO1	Q99216	274 aa	Known RBP	4.19	□□□□□ -1.74
snR11	snR11	MAK32	P23060	363 aa		4.18	□□□□□ -1.74
snR11	snR11	MCM3	P24279	971 aa	Known RBP	4.18	□□□□□ -1.74
snR11	snR11	ECM32	P32644	1121 aa	Known RBP	4.18	□□□□□ -1.74
snR11	snR11	VPS24	P36095	224 aa	Known RBP	4.18	□□□□□ -1.74
snR11	snR11	FTH1	P38310	465 aa		4.18	□□□□□ -1.74
snR11	snR11	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
snR11	snR11	PSA1	P41940	361 aa	Known RBP	4.18	□□□□□ -1.74
snR11	snR11	SNO3	P43544	222 aa		4.18	□□□□□ -1.74
snR11	snR11	NET1	P47035	1189 aa		4.18	□□□□□ -1.74
snR11	snR11	PRS5	Q12265	496 aa	Known RBP	4.18	□□□□□ -1.74
snR11	snR11	YBR255C-A	Q3E776	120 aa		4.18	□□□□□ -1.74
snR11	snR11	RTC1	Q08281	1341 aa		4.18	□□□□□ -1.74
snR11	snR11	CET1	O13297	549 aa	Predicted RBP	4.17	□□□□□ -1.74
snR11	snR11	PDE1	P22434	369 aa		4.17	□□□□□ -1.74
snR11	snR11	RIT1	P23796	513 aa		4.17	□□□□□ -1.74
snR11	snR11	PTP1	P25044	335 aa		4.17	□□□□□ -1.74
snR11	snR11	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
snR11	snR11	HIS6	P40545	261 aa		4.17	□□□□□ -1.74
snR11	snR11	TAN1	P53072	289 aa	Predicted RBP	4.17	□□□□□ -1.74
snR11	snR11	CPR6	P53691	371 aa	Known RBP	4.17	□□□□□ -1.74
snR11	snR11	TPO3	Q06451	622 aa		4.17	□□□□□ -1.74
snR11	snR11	LYS21	Q12122	440 aa	Known RBP	4.17	□□□□□ -1.74
snR11	snR11	BI2	P03873	423 aa		4.16	□□□□□ -1.74
snR11	snR11	BIK1	P11709	440 aa		4.16	□□□□□ -1.74
snR11	snR11	URE2	P23202	354 aa	Known RBP	4.16	□□□□□ -1.74
snR11	snR11	PWP2	P25635	923 aa	Known RBP	4.16	□□□□□ -1.74
snR11	snR11	CAB2	P40506	365 aa		4.16	□□□□□ -1.74
snR11	snR11	IMA1	P53051	589 aa		4.16	□□□□□ -1.74
snR11	snR11	IDP3	P53982	420 aa	Known RBP	4.16	□□□□□ -1.74
snR11	snR11	ERG13	P54839	491 aa	Known RBP	4.16	□□□□□ -1.74
snR11	snR11	STP1	Q00947	519 aa		4.16	□□□□□ -1.74
snR11	snR11	YPL071C	Q02864	156 aa		4.16	□□□□□ -1.74
snR11	snR11	IWR1	Q07532	353 aa	Predicted RBP	4.16	□□□□□ -1.74
snR11	snR11	YPL191C	Q08930	360 aa		4.16	□□□□□ -1.74
snR11	snR11	RRP6	Q12149	733 aa	Known RBP	4.16	□□□□□ -1.74
snR11	snR11	ADE3	P07245	946 aa	Known RBP	4.15	□□□□□ -1.75
snR11	snR11	POL3	P15436	1097 aa		4.15	□□□□□ -1.75
snR11	snR11	SWI4	P25302	1093 aa	Known RBP	4.15	□□□□□ -1.75
snR11	snR11	TMT1	P32643	299 aa		4.15	□□□□□ -1.75
snR11	snR11	VBA2	P38358	474 aa	Known RBP	4.15	□□□□□ -1.75
snR11	snR11	IMD2	P38697	523 aa	Known RBP	4.15	□□□□□ -1.75
snR11	snR11	YHL041W	P38730	149 aa		4.15	□□□□□ -1.75
snR11	snR11	IES5	P40060	125 aa		4.15	□□□□□ -1.75
snR11	snR11	UBP7	P40453	1071 aa		4.15	□□□□□ -1.75
snR11	snR11	IMD3	P50095	523 aa	Known RBP	4.15	□□□□□ -1.75
snR11	snR11	TAM41	P53230	385 aa		4.15	□□□□□ -1.75
snR11	snR11	RPF2	P36160	344 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms