RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C NKP1Q12493 238 aa5.7□□□□□ -1.5
CTF18YMR078C SSM4P40318 1319 aa5.7□□□□□ -1.5
CTF18YMR078C CPA2P03965 1118 aaKnown RBP5.7□□□□□ -1.5
CTF18YMR078C STE12P13574 688 aa5.7□□□□□ -1.5
CTF18YMR078C RNR3P21672 869 aaKnown RBP5.7□□□□□ -1.5
CTF18YMR078C MUP3P38734 546 aa5.7□□□□□ -1.5
CTF18YMR078C PIH1P38768 344 aa5.7□□□□□ -1.5
CTF18YMR078C COQ6P53318 479 aa5.7□□□□□ -1.5
CTF18YMR078C VID22Q05934 901 aa5.7□□□□□ -1.5
CTF18YMR078C PCL8Q08966 492 aa5.7□□□□□ -1.5
CTF18YMR078C TPK2P06245 380 aa5.69□□□□□ -1.5
CTF18YMR078C PET122P10355 254 aa5.69□□□□□ -1.5
CTF18YMR078C SSH4P32343 579 aa5.69□□□□□ -1.5
CTF18YMR078C TDP1P38319 544 aa5.69□□□□□ -1.5
CTF18YMR078C SUB1P54000 292 aaKnown RBP5.69□□□□□ -1.5
CTF18YMR078C CSR1Q06705 408 aaKnown RBP5.69□□□□□ -1.5
CTF18YMR078C DMC1P25453 334 aa5.68□□□□□ -1.5
CTF18YMR078C AXL2P38928 823 aa5.68□□□□□ -1.5
CTF18YMR078C BUD16P39988 312 aa5.68□□□□□ -1.5
CTF18YMR078C CPR8P53728 308 aa5.68□□□□□ -1.5
CTF18YMR078C STP3Q05937 343 aa5.68□□□□□ -1.5
CTF18YMR078C VAM6Q07468 1049 aa5.68□□□□□ -1.5
CTF18YMR078C GUK1P15454 187 aaKnown RBP5.68□□□□□ -1.5
CTF18YMR078C CDC43P18898 376 aa5.68□□□□□ -1.5
CTF18YMR078C YPL108WQ02872 168 aaPredicted RBP5.68□□□□□ -1.5
CTF18YMR078C NEW1Q08972 1196 aaKnown RBP5.68□□□□□ -1.5
CTF18YMR078C PNO1Q99216 274 aaKnown RBP5.68□□□□□ -1.5
CTF18YMR078C WHI2P12611 486 aa5.67□□□□□ -1.5
CTF18YMR078C GDA1P32621 518 aa5.67□□□□□ -1.5
CTF18YMR078C GEX2P36173 615 aa5.67□□□□□ -1.5
CTF18YMR078C GIS1Q03833 894 aa5.67□□□□□ -1.5
CTF18YMR078C ARG7Q04728 441 aa5.67□□□□□ -1.5
CTF18YMR078C YER175W-AQ8TGU4 54 aa5.67□□□□□ -1.5
CTF18YMR078C URK1P27515 501 aa5.67□□□□□ -1.5
CTF18YMR078C QRI1P43123 477 aaKnown RBP5.67□□□□□ -1.5
CTF18YMR078C PSP1P50896 841 aaKnown RBP5.67□□□□□ -1.5
CTF18YMR078C IMO32P53219 342 aa5.67□□□□□ -1.5
CTF18YMR078C YDL242WQ07746 117 aa5.67□□□□□ -1.5
CTF18YMR078C MCM10P32354 571 aa5.66□□□□□ -1.5
CTF18YMR078C RRN3P36070 627 aa5.66□□□□□ -1.5
CTF18YMR078C MEP3P53390 489 aa5.66□□□□□ -1.5
CTF18YMR078C UBP16Q02863 499 aa5.66□□□□□ -1.5
CTF18YMR078C PRS5Q12265 496 aaKnown RBP5.66□□□□□ -1.5
CTF18YMR078C COX17Q12287 69 aa5.66□□□□□ -1.5
CTF18YMR078C YFL015CP43578 164 aa5.66□□□□□ -1.5
CTF18YMR078C KGD2P19262 463 aaPredicted RBP5.65□□□□□ -1.5
CTF18YMR078C PMA2P19657 947 aa5.65□□□□□ -1.5
CTF18YMR078C YMC1P32331 307 aa5.65□□□□□ -1.5
CTF18YMR078C YEL020CP39994 560 aa5.65□□□□□ -1.5
CTF18YMR078C RAD26P40352 1085 aa5.65□□□□□ -1.5
CTF18YMR078C ZAP1P47043 880 aa5.65□□□□□ -1.5
CTF18YMR078C YBR255C-AQ3E776 120 aa5.65□□□□□ -1.5
CTF18YMR078C CSL4P53859 292 aaPredicted RBP5.64□□□□□ -1.51
CTF18YMR078C RAD33Q04231 177 aa5.64□□□□□ -1.51
CTF18YMR078C LCB4Q12246 624 aa5.64□□□□□ -1.51
CTF18YMR078C CHO2P05374 869 aaKnown RBP5.64□□□□□ -1.51
CTF18YMR078C RPL7AP05737 244 aaKnown RBP5.64□□□□□ -1.51
CTF18YMR078C SLC1P33333 303 aa5.64□□□□□ -1.51
CTF18YMR078C YER010CP40011 234 aa5.64□□□□□ -1.51
CTF18YMR078C FAF1P40546 346 aaPredicted RBP5.64□□□□□ -1.51
CTF18YMR078C RPL7BQ12213 244 aaKnown RBP5.64□□□□□ -1.51
CTF18YMR078C SEC3P33332 1336 aaKnown RBP5.64□□□□□ -1.51
CTF18YMR078C COG1P53079 417 aa5.63□□□□□ -1.51
CTF18YMR078C WAR1Q03631 944 aa5.63□□□□□ -1.51
CTF18YMR078C CRT10Q08226 957 aa5.63□□□□□ -1.51
CTF18YMR078C YJU2P28320 278 aaPredicted RBP5.63□□□□□ -1.51
CTF18YMR078C MRPL36P36531 177 aa5.63□□□□□ -1.51
CTF18YMR078C MRI1Q06489 411 aaKnown RBP5.63□□□□□ -1.51
CTF18YMR078C TY2A-LR1P0C2J4 438 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-FP0CX61 438 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-GR2P0CX62 438 aa5.62□□□□□ -1.51
CTF18YMR078C SAT4P25333 603 aaKnown RBP5.62□□□□□ -1.51
CTF18YMR078C TY2A-CP25383 438 aa5.62□□□□□ -1.51
CTF18YMR078C CBF2P32504 956 aa5.62□□□□□ -1.51
CTF18YMR078C MAM1P40065 302 aa5.62□□□□□ -1.51
CTF18YMR078C TDA10P42938 290 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-DR2Q03483 438 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-BQ12260 438 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-OR2Q12293 438 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-DR1Q12392 438 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-OR1Q12439 438 aa5.62□□□□□ -1.51
CTF18YMR078C YOL087CQ99247 1116 aa5.62□□□□□ -1.51
CTF18YMR078C TY2A-DR3Q99303 438 aa5.62□□□□□ -1.51
CTF18YMR078C TPK1P06244 397 aa5.62□□□□□ -1.51
CTF18YMR078C PDE1P22434 369 aa5.62□□□□□ -1.51
CTF18YMR078C RRP43P25359 394 aaPredicted RBP5.62□□□□□ -1.51
CTF18YMR078C RER1P25560 188 aa5.62□□□□□ -1.51
CTF18YMR078C AAD3P25612 363 aa5.62□□□□□ -1.51
CTF18YMR078C UGP1P32861 499 aaKnown RBP5.62□□□□□ -1.51
CTF18YMR078C ERC1P38767 581 aa5.62□□□□□ -1.51
CTF18YMR078C KAP123P40069 1113 aaKnown RBP5.62□□□□□ -1.51
CTF18YMR078C DPH1P40487 425 aaKnown RBP5.62□□□□□ -1.51
CTF18YMR078C YGR079WP53249 370 aa5.62□□□□□ -1.51
CTF18YMR078C MTG1Q03151 367 aaPredicted RBP5.62□□□□□ -1.51
CTF18YMR078C GTB1Q04924 702 aa5.62□□□□□ -1.51
CTF18YMR078C HRD3Q05787 833 aa5.62□□□□□ -1.51
CTF18YMR078C LNP1P38878 278 aa5.61□□□□□ -1.51
CTF18YMR078C YIL166CP40445 542 aa5.61□□□□□ -1.51
CTF18YMR078C NPA3P47122 385 aa5.61□□□□□ -1.51
CTF18YMR078C MRK1P50873 501 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms