RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W IFA38P38286 347 aa3.7□□□□□ -1.82
YLR400WYLR400W YHR033WP38690 423 aa3.7□□□□□ -1.82
YLR400WYLR400W RAD26P40352 1085 aa3.7□□□□□ -1.82
YLR400WYLR400W ESL1P40456 1118 aa3.7□□□□□ -1.82
YLR400WYLR400W SMK1P41808 388 aa3.7□□□□□ -1.82
YLR400WYLR400W UPF3P48412 387 aaKnown RBP3.7□□□□□ -1.82
YLR400WYLR400W VID22Q05934 901 aa3.7□□□□□ -1.82
YLR400WYLR400W IMH1Q06704 911 aaKnown RBP3.7□□□□□ -1.82
YLR400WYLR400W IWR1Q07532 353 aaPredicted RBP3.7□□□□□ -1.82
YLR400WYLR400W AAD4Q07747 329 aa3.7□□□□□ -1.82
YLR400WYLR400W SDH5Q08230 162 aa3.7□□□□□ -1.82
YLR400WYLR400W POL3P15436 1097 aa3.69□□□□□ -1.82
YLR400WYLR400W SWI4P25302 1093 aaKnown RBP3.69□□□□□ -1.82
YLR400WYLR400W PRP45P28004 379 aaPredicted RBP3.69□□□□□ -1.82
YLR400WYLR400W HOT13P36078 116 aa3.69□□□□□ -1.82
YLR400WYLR400W CRG1P38892 291 aaRIP-Chip data3.69□□□□□ -1.82not detected
YLR400WYLR400W NDE1P40215 560 aa3.69□□□□□ -1.82
YLR400WYLR400W DPH1P40487 425 aaKnown RBP3.69□□□□□ -1.82
YLR400WYLR400W CTF18P49956 741 aa3.69□□□□□ -1.82
YLR400WYLR400W IMA1P53051 589 aa3.69□□□□□ -1.82
YLR400WYLR400W CPR8P53728 308 aa3.69□□□□□ -1.82
YLR400WYLR400W ACS1Q01574 713 aa3.69□□□□□ -1.82
YLR400WYLR400W PPN1Q04119 674 aa3.69□□□□□ -1.82
YLR400WYLR400W TRM8Q12009 286 aa3.69□□□□□ -1.82
YLR400WYLR400W AI5_ALPHAQ9ZZX1 630 aa3.69□□□□□ -1.82
YLR400WYLR400W RPS9BP05755 195 aaKnown RBP3.68□□□□□ -1.82
YLR400WYLR400W CDC31P06704 161 aaKnown RBP3.68□□□□□ -1.82
YLR400WYLR400W NUC1P08466 329 aa3.68□□□□□ -1.82
YLR400WYLR400W BIK1P11709 440 aa3.68□□□□□ -1.82
YLR400WYLR400W GUK1P15454 187 aaKnown RBP3.68□□□□□ -1.82
YLR400WYLR400W CLB4P24871 460 aa3.68□□□□□ -1.82
YLR400WYLR400W MUD2P36084 527 aaKnown RBP3.68□□□□□ -1.82
YLR400WYLR400W VPS8P39702 1274 aa3.68□□□□□ -1.82
YLR400WYLR400W FTR1P40088 404 aa3.68□□□□□ -1.82
YLR400WYLR400W TMA108P40462 946 aa3.68□□□□□ -1.82
YLR400WYLR400W GSM1P42950 618 aa3.68□□□□□ -1.82
YLR400WYLR400W SPO1P53541 631 aa3.68□□□□□ -1.82
YLR400WYLR400W DAK1P54838 584 aaKnown RBP3.68□□□□□ -1.82
YLR400WYLR400W CRD1Q07560 283 aa3.68□□□□□ -1.82
YLR400WYLR400W LEU2P04173 364 aaPredicted RBP3.67□□□□□ -1.82
YLR400WYLR400W ADE3P07245 946 aaKnown RBP3.67□□□□□ -1.82
YLR400WYLR400W MIS1P09440 975 aaKnown RBP3.67□□□□□ -1.82
YLR400WYLR400W SAN1P22470 610 aa3.67□□□□□ -1.82
YLR400WYLR400W PRP22P24384 1145 aaKnown RBP3.67□□□□□ -1.82
YLR400WYLR400W CBF2P32504 956 aa3.67□□□□□ -1.82
YLR400WYLR400W SLC1P33333 303 aa3.67□□□□□ -1.82
YLR400WYLR400W NPR3P38742 1146 aa3.67□□□□□ -1.82
YLR400WYLR400W NOP16P40007 231 aaKnown RBP3.67□□□□□ -1.82
YLR400WYLR400W KAP123P40069 1113 aaKnown RBP3.67□□□□□ -1.82
YLR400WYLR400W YKU80Q04437 629 aa3.67□□□□□ -1.82
YLR400WYLR400W YCG1Q06680 1035 aa3.67□□□□□ -1.82
YLR400WYLR400W TUP1P16649 713 aa3.66□□□□□ -1.82
YLR400WYLR400W PMA2P19657 947 aa3.66□□□□□ -1.82
YLR400WYLR400W RIT1P23796 513 aa3.66□□□□□ -1.82
YLR400WYLR400W PAH1P32567 862 aa3.66□□□□□ -1.82
YLR400WYLR400W PPE1P38796 400 aa3.66□□□□□ -1.82
YLR400WYLR400W YER010CP40011 234 aa3.66□□□□□ -1.82
YLR400WYLR400W TMN3P40071 706 aa3.66□□□□□ -1.82
YLR400WYLR400W PSF2P40359 213 aa3.66□□□□□ -1.82
YLR400WYLR400W RIC1P40395 1056 aa3.66□□□□□ -1.82
YLR400WYLR400W THI6P41835 540 aa3.66□□□□□ -1.82
YLR400WYLR400W POL31P46957 487 aa3.66□□□□□ -1.82
YLR400WYLR400W SRB7P47822 140 aa3.66□□□□□ -1.82
YLR400WYLR400W SQS1P53866 767 aaKnown RBP3.66□□□□□ -1.82
YLR400WYLR400W TRS23Q03784 219 aa3.66□□□□□ -1.82
YLR400WYLR400W YMR018WQ04364 514 aa3.66□□□□□ -1.82
YLR400WYLR400W CIR2Q08822 631 aa3.66□□□□□ -1.82
YLR400WYLR400W HOS1Q12214 470 aa3.66□□□□□ -1.82
YLR400WYLR400W AAC3P18238 307 aa3.65□□□□□ -1.83
YLR400WYLR400W BET2P20133 325 aa3.65□□□□□ -1.83
YLR400WYLR400W YUR1P26725 428 aa3.65□□□□□ -1.83
YLR400WYLR400W ARP2P32381 391 aaKnown RBP3.65□□□□□ -1.83
YLR400WYLR400W RKM3P38222 552 aa3.65□□□□□ -1.83
YLR400WYLR400W EHT1P38295 451 aa3.65□□□□□ -1.83
YLR400WYLR400W ULP2P40537 1034 aaPredicted RBP3.65□□□□□ -1.83
YLR400WYLR400W BST1P43571 1029 aa3.65□□□□□ -1.83
YLR400WYLR400W PSP1P50896 841 aaKnown RBP3.65□□□□□ -1.83
YLR400WYLR400W MDG1P53885 366 aa3.65□□□□□ -1.83
YLR400WYLR400W MPS1P54199 764 aa3.65□□□□□ -1.83
YLR400WYLR400W FDC1Q03034 503 aa3.65□□□□□ -1.83
YLR400WYLR400W TSR2Q06672 205 aaKnown RBP3.65□□□□□ -1.83
YLR400WYLR400W CSR1Q06705 408 aaKnown RBP3.65□□□□□ -1.83
YLR400WYLR400W FRE7Q12333 620 aa3.65□□□□□ -1.83
YLR400WYLR400W ERP4Q12450 207 aa3.65□□□□□ -1.83
YLR400WYLR400W PCD1Q12524 340 aa3.65□□□□□ -1.83
YLR400WYLR400W FOB1O13329 566 aa3.64□□□□□ -1.83
YLR400WYLR400W INH1P01097 85 aa3.64□□□□□ -1.83
YLR400WYLR400W TUF1P02992 437 aaKnown RBP3.64□□□□□ -1.83
YLR400WYLR400W MET8P15807 274 aa3.64□□□□□ -1.83
YLR400WYLR400W PIH1P38768 344 aa3.64□□□□□ -1.83
YLR400WYLR400W FSH1P38777 243 aaKnown RBP3.64□□□□□ -1.83
YLR400WYLR400W BPL1P48445 690 aaPredicted RBP3.64□□□□□ -1.83
YLR400WYLR400W SCS3P53012 380 aa3.64□□□□□ -1.83
YLR400WYLR400W TRS31Q03337 283 aa3.64□□□□□ -1.83
YLR400WYLR400W ARA2Q04212 335 aa3.64□□□□□ -1.83
YLR400WYLR400W ARR3Q06598 404 aa3.64□□□□□ -1.83
YLR400WYLR400W ICL2Q12031 575 aa3.64□□□□□ -1.83
YLR400WYLR400W ZPS1Q12512 249 aa3.64□□□□□ -1.83
YLR400WYLR400W SEM1O94742 89 aa3.63□□□□□ -1.83
YLR400WYLR400W FUM1P08417 488 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms