RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	SPO21	Q12411	609 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	YOR019W	Q99248	730 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	STF1	P01098	86 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	SST2	P11972	698 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	MSN1	P22148	382 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	CAD1	P24813	409 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	FUN30	P31380	1131 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	MND2	P40577	368 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	DLD2	P46681	530 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	YJL049W	P47048	450 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	UPF3	P48412	387 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	IMD4	P50094	524 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	PIP2	P52960	996 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	KTR6	P54070	446 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	FOX2	Q02207	900 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	SLU7	Q02775	382 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	MRPS17	Q03246	237 aa	Predicted RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	COA4	Q05809	96 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	KAP95	Q06142	861 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	MCM21	Q06675	368 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	YPD1	Q07688	167 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	NYV1	Q12255	253 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	TUS1	Q06412	1307 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	FUR4	P05316	633 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	NTC20	P38302	140 aa	Predicted RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	TDP1	P38319	544 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	VMA22	P38784	181 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	NIT1	P40447	199 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	SHQ1	P40486	507 aa	Predicted RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	MDJ2	P42834	146 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	PCL10	P53124	433 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	MLC1	P53141	149 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	DAK1	P54838	584 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	TOF2	Q02208	771 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	ELP3	Q02908	557 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	YMR010W	Q03687	405 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	RVB1	Q03940	463 aa	Known RBP	3.52	□□□□□ -1.85
PEX1	YKL197C	BSC2	Q05611	235 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	PSF3	Q12146	194 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	BBP1	Q12365	385 aa		3.52	□□□□□ -1.85
PEX1	YKL197C	PHO8	P11491	566 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	DAL81	P21657	970 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	APA2	P22108	325 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	SPT10	P35208	640 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	PGM2	P37012	569 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	POP7	P38291	140 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	KSP1	P38691	1029 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	JLP2	P40206	208 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	FYV10	P40492	516 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	MAL11	P53048	616 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	GPG1	P53130	126 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	YGR012W	P53206	393 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	YDR514C	Q04408	483 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	DPB4	Q04603	196 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	COX20	Q04935	205 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	GPI13	Q07830	1017 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	ICL2	Q12031	575 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	VIK1	Q12045	647 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	DAS2	Q12084	232 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	GPM1	P00950	247 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	TUP1	P16649	713 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	RPL8A	P17076	256 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	THR1	P17423	357 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	SED4	P25365	1065 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	CDC15	P27636	974 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	RPL8B	P29453	256 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	ZIP1	P31111	875 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	HXT3	P32466	567 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	MSN4	P33749	630 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	KES1	P35844	434 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	FTH1	P38310	465 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	GND1	P38720	489 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	STB2	P46679	850 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	NOP9	P47077	666 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	ASE1	P50275	885 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	RCF2	P53721	224 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	ARA2	Q04212	335 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	PDR8	Q06149	701 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	EMG1	Q06287	252 aa	Known RBP	3.51	□□□□□ -1.85
PEX1	YKL197C	DXO1	Q06349	442 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	YLL007C	Q07799	665 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	VHS3	Q08438	674 aa		3.51	□□□□□ -1.85
PEX1	YKL197C	YLR358C	O13565	187 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	SCEI	P03882	235 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	GPA2	P10823	449 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	BIK1	P11709	440 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	HOM2	P13663	365 aa	Known RBP	3.5	□□□□□ -1.85
PEX1	YKL197C	KRS1	P15180	591 aa	Known RBP	3.5	□□□□□ -1.85
PEX1	YKL197C	ITR2	P30606	609 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	PRP19	P32523	503 aa	Known RBP	3.5	□□□□□ -1.85
PEX1	YKL197C	OCT1	P35999	772 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	APM2	P38700	605 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	RAD55	P38953	406 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	TIF4631	P39935	952 aa	Known RBP	3.5	□□□□□ -1.85
PEX1	YKL197C	LSM5	P40089	93 aa	Known RBP	3.5	□□□□□ -1.85
PEX1	YKL197C	CEP3	P40969	608 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	RAI1	P53063	387 aa	Known RBP	3.5	□□□□□ -1.85
PEX1	YKL197C	YGL082W	P53155	381 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	MEP3	P53390	489 aa		3.5	□□□□□ -1.85
PEX1	YKL197C	GTR1	Q00582	310 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms