RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C YNR071CP53757 342 aa3.93□□□□□ -1.78
ATG27YJL178C RPS15Q01855 142 aaKnown RBP3.93□□□□□ -1.78
ATG27YJL178C ARG7Q04728 441 aa3.93□□□□□ -1.78
ATG27YJL178C DNF2Q12675 1612 aa3.92□□□□□ -1.78
ATG27YJL178C CPA2P03965 1118 aaKnown RBP3.92□□□□□ -1.78
ATG27YJL178C SEC12P11655 471 aa3.92□□□□□ -1.78
ATG27YJL178C WHI2P12611 486 aa3.92□□□□□ -1.78
ATG27YJL178C PHO3P24031 467 aa3.92□□□□□ -1.78
ATG27YJL178C COQ6P53318 479 aa3.92□□□□□ -1.78
ATG27YJL178C USA1Q03714 838 aa3.92□□□□□ -1.78
ATG27YJL178C IOC4Q04213 475 aa3.92□□□□□ -1.78
ATG27YJL178C DBP10Q12389 995 aaKnown RBP3.92□□□□□ -1.78
ATG27YJL178C NUP192P47054 1683 aa3.91□□□□□ -1.78
ATG27YJL178C NUP188P52593 1655 aaKnown RBP3.91□□□□□ -1.78
ATG27YJL178C LEU2P04173 364 aaPredicted RBP3.91□□□□□ -1.78
ATG27YJL178C PMA2P19657 947 aa3.91□□□□□ -1.78
ATG27YJL178C PET309P32522 965 aaPredicted RBP3.91□□□□□ -1.78
ATG27YJL178C TGL1P34163 548 aa3.91□□□□□ -1.78
ATG27YJL178C CCL1P37366 393 aa3.91□□□□□ -1.78
ATG27YJL178C STB5P38699 743 aa3.91□□□□□ -1.78
ATG27YJL178C SSP120P39931 234 aaKnown RBP3.91□□□□□ -1.78
ATG27YJL178C CNM67P53865 581 aaKnown RBP3.91□□□□□ -1.78
ATG27YJL178C CEG1Q01159 459 aaPredicted RBP3.91□□□□□ -1.78
ATG27YJL178C GFD1Q04839 188 aaKnown RBP3.91□□□□□ -1.78
ATG27YJL178C HOF1Q05080 669 aa3.91□□□□□ -1.78
ATG27YJL178C PSF3Q12146 194 aa3.91□□□□□ -1.78
ATG27YJL178C HOS1Q12214 470 aa3.91□□□□□ -1.78
ATG27YJL178C DRS2P39524 1355 aa3.9□□□□□ -1.78
ATG27YJL178C IML1P47170 1584 aa3.9□□□□□ -1.78
ATG27YJL178C YMR084WA2P2R3 262 aa3.9□□□□□ -1.79
ATG27YJL178C RPL7AP05737 244 aaKnown RBP3.9□□□□□ -1.79
ATG27YJL178C ADH4P10127 382 aa3.9□□□□□ -1.79
ATG27YJL178C SST2P11972 698 aaKnown RBP3.9□□□□□ -1.79
ATG27YJL178C CBP3P21560 335 aa3.9□□□□□ -1.79
ATG27YJL178C AAD3P25612 363 aa3.9□□□□□ -1.79
ATG27YJL178C DSS4P32601 143 aa3.9□□□□□ -1.79
ATG27YJL178C NIC96P34077 839 aa3.9□□□□□ -1.79
ATG27YJL178C ACS1Q01574 713 aa3.9□□□□□ -1.79
ATG27YJL178C SEG1Q04279 960 aa3.9□□□□□ -1.79
ATG27YJL178C RPL7BQ12213 244 aaKnown RBP3.9□□□□□ -1.79
ATG27YJL178C SPT7P35177 1332 aa3.9□□□□□ -1.79
ATG27YJL178C TRM3Q07527 1436 aa3.89□□□□□ -1.79
ATG27YJL178C SAW1P39735 261 aa3.89□□□□□ -1.79
ATG27YJL178C IMA5P40884 581 aa3.89□□□□□ -1.79
ATG27YJL178C ASK10P48361 1146 aa3.89□□□□□ -1.79
ATG27YJL178C SAP4P53036 818 aa3.89□□□□□ -1.79
ATG27YJL178C PGK1P00560 416 aaKnown RBP3.88□□□□□ -1.79
ATG27YJL178C VAS1P07806 1104 aaKnown RBP3.88□□□□□ -1.79
ATG27YJL178C HEM1P09950 548 aaPredicted RBP3.88□□□□□ -1.79
ATG27YJL178C ERG11P10614 530 aa3.88□□□□□ -1.79
ATG27YJL178C HOT13P36078 116 aa3.88□□□□□ -1.79
ATG27YJL178C YPT10P38146 199 aa3.88□□□□□ -1.79
ATG27YJL178C GSM1P42950 618 aa3.88□□□□□ -1.79
ATG27YJL178C COS12P53053 380 aa3.88□□□□□ -1.79
ATG27YJL178C MET14Q02196 202 aa3.88□□□□□ -1.79
ATG27YJL178C RIM13Q03792 727 aa3.88□□□□□ -1.79
ATG27YJL178C YOL057WQ08225 711 aa3.88□□□□□ -1.79
ATG27YJL178C RAV1P47104 1357 aa3.88□□□□□ -1.79
ATG27YJL178C TY3B-IQ7LHG5 1498 aaKnown RBP3.87□□□□□ -1.79
ATG27YJL178C GAL1P04385 528 aa3.87□□□□□ -1.79
ATG27YJL178C RNR3P21672 869 aaKnown RBP3.87□□□□□ -1.79
ATG27YJL178C RPC34P32910 317 aa3.87□□□□□ -1.79
ATG27YJL178C SDS22P36047 338 aa3.87□□□□□ -1.79
ATG27YJL178C TAF5P38129 798 aa3.87□□□□□ -1.79
ATG27YJL178C SWD1P39706 426 aa3.87□□□□□ -1.79
ATG27YJL178C LTP1P40347 161 aa3.87□□□□□ -1.79
ATG27YJL178C OPT1P40897 799 aa3.87□□□□□ -1.79
ATG27YJL178C TAX4P47030 604 aa3.87□□□□□ -1.79
ATG27YJL178C PUS4P48567 403 aaKnown RBP3.87□□□□□ -1.79
ATG27YJL178C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
ATG27YJL178C AI5_ALPHAQ9ZZX1 630 aa3.87□□□□□ -1.79
ATG27YJL178C AAC1P04710 309 aa3.86□□□□□ -1.79
ATG27YJL178C YPK1P12688 680 aaKnown RBP3.86□□□□□ -1.79
ATG27YJL178C BET2P20133 325 aa3.86□□□□□ -1.79
ATG27YJL178C YJR008WP47085 338 aa3.86□□□□□ -1.79
ATG27YJL178C PIP2P52960 996 aa3.86□□□□□ -1.79
ATG27YJL178C IRC3Q06683 689 aa3.86□□□□□ -1.79
ATG27YJL178C YOL114CQ12322 202 aa3.86□□□□□ -1.79
ATG27YJL178C ARP7Q12406 477 aa3.86□□□□□ -1.79
ATG27YJL178C RTC1Q08281 1341 aa3.86□□□□□ -1.79
ATG27YJL178C MBR1P23493 339 aa3.85□□□□□ -1.79
ATG27YJL178C PRE2P30656 287 aaKnown RBP3.85□□□□□ -1.79
ATG27YJL178C APD1P38281 316 aa3.85□□□□□ -1.79
ATG27YJL178C HIS6P40545 261 aa3.85□□□□□ -1.79
ATG27YJL178C YFL015CP43578 164 aa3.85□□□□□ -1.79
ATG27YJL178C MAD3P47074 515 aa3.85□□□□□ -1.79
ATG27YJL178C MOT3P54785 490 aaKnown RBP3.85□□□□□ -1.79
ATG27YJL178C TRI1Q05024 226 aa3.85□□□□□ -1.79
ATG27YJL178C ENT2Q05785 613 aa3.85□□□□□ -1.79
ATG27YJL178C CRT10Q08226 957 aa3.85□□□□□ -1.79
ATG27YJL178C NUP1P20676 1076 aa3.84□□□□□ -1.79
ATG27YJL178C APN1P22936 367 aa3.84□□□□□ -1.79
ATG27YJL178C RPS7AP26786 190 aaKnown RBP3.84□□□□□ -1.79
ATG27YJL178C PRP45P28004 379 aaPredicted RBP3.84□□□□□ -1.79
ATG27YJL178C MRPL9P31334 269 aa3.84□□□□□ -1.79
ATG27YJL178C YKL133CP36066 463 aa3.84□□□□□ -1.79
ATG27YJL178C SDH8P38345 138 aa3.84□□□□□ -1.79
ATG27YJL178C SNM1P40993 198 aa3.84□□□□□ -1.79
ATG27YJL178C TDA10P42938 290 aa3.84□□□□□ -1.79
ATG27YJL178C BNA3P47039 444 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms