RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C FSH1P38777 243 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C BFR1P38934 470 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RTT101YJL047C CAB2P40506 365 aa2.14□□□□□ -2.07
RTT101YJL047C SGN1P40561 250 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RTT101YJL047C YIR007WP40566 764 aa2.14□□□□□ -2.07
RTT101YJL047C BUD8P41698 603 aa2.14□□□□□ -2.07
RTT101YJL047C GCV2P49095 1034 aa2.14□□□□□ -2.07
RTT101YJL047C LYS4P49367 693 aaPredicted RBP2.14□□□□□ -2.07
RTT101YJL047C YGR266WP53326 701 aa2.14□□□□□ -2.07
RTT101YJL047C OGG1P53397 376 aaPredicted RBP2.14□□□□□ -2.07
RTT101YJL047C DUS1P53759 423 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C VTC3Q02725 835 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-DR2Q03483 438 aa2.14□□□□□ -2.07
RTT101YJL047C TRI1Q05024 226 aa2.14□□□□□ -2.07
RTT101YJL047C RCN2Q12044 265 aa2.14□□□□□ -2.07
RTT101YJL047C CHS5Q12114 671 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C YLL054CQ12244 843 aa2.14□□□□□ -2.07
RTT101YJL047C RPN5Q12250 445 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C TY2A-BQ12260 438 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-OR2Q12293 438 aa2.14□□□□□ -2.07
RTT101YJL047C SUL2Q12325 893 aa2.14□□□□□ -2.07
RTT101YJL047C GPR1Q12361 961 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-DR1Q12392 438 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-OR1Q12439 438 aa2.14□□□□□ -2.07
RTT101YJL047C SPE4Q12455 300 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-DR3Q99303 438 aa2.14□□□□□ -2.07
RTT101YJL047C PWP1P21304 576 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C ERG8P24521 451 aa2.14□□□□□ -2.07
RTT101YJL047C YCR051WP25631 222 aa2.14□□□□□ -2.07
RTT101YJL047C ATG19P35193 415 aa2.14□□□□□ -2.07
RTT101YJL047C MIC60P36112 540 aa2.14□□□□□ -2.07
RTT101YJL047C POL12P38121 705 aaPredicted RBP2.14□□□□□ -2.07
RTT101YJL047C THI2P38141 450 aa2.14□□□□□ -2.07
RTT101YJL047C YSW1P38280 609 aa2.14□□□□□ -2.07
RTT101YJL047C MTG2P38860 518 aa2.14□□□□□ -2.07
RTT101YJL047C JHD1P40034 492 aa2.14□□□□□ -2.07
RTT101YJL047C SEC9P40357 651 aa2.14□□□□□ -2.07
RTT101YJL047C PFK26P40433 827 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C BUD27P43573 796 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RTT101YJL047C RPC11Q04307 110 aaPredicted RBP2.14□□□□□ -2.07
RTT101YJL047C RBA50Q04418 439 aa2.14□□□□□ -2.07
RTT101YJL047C SSL1Q04673 461 aaPredicted RBP2.14□□□□□ -2.07
RTT101YJL047C YMR074CQ04773 145 aa2.14□□□□□ -2.07
RTT101YJL047C RCO1Q04779 684 aa2.14□□□□□ -2.07
RTT101YJL047C ROY1Q04847 553 aa2.14□□□□□ -2.07
RTT101YJL047C NOP6Q07623 225 aaKnown RBP2.14□□□□□ -2.07
RTT101YJL047C CLB3P24870 427 aa2.13□□□□□ -2.07
RTT101YJL047C RPS7AP26786 190 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C YSC84P32793 468 aa2.13□□□□□ -2.07
RTT101YJL047C SWH1P35845 1188 aa2.13□□□□□ -2.07
RTT101YJL047C ALY1P36117 915 aa2.13□□□□□ -2.07
RTT101YJL047C CTM1P38818 585 aa2.13□□□□□ -2.07
RTT101YJL047C RGI2P40188 164 aa2.13□□□□□ -2.07
RTT101YJL047C DOT5P40553 215 aa2.13□□□□□ -2.07
RTT101YJL047C MET28P40573 187 aa2.13□□□□□ -2.07
RTT101YJL047C MKT1P40850 830 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C LAM5P43560 674 aa2.13□□□□□ -2.07
RTT101YJL047C MET12P46151 657 aa2.13□□□□□ -2.07
RTT101YJL047C GLO1P50107 326 aa2.13□□□□□ -2.07
RTT101YJL047C RPN14P53196 417 aa2.13□□□□□ -2.07
RTT101YJL047C PEF1P53238 335 aa2.13□□□□□ -2.07
RTT101YJL047C CSL4P53859 292 aaPredicted RBP2.13□□□□□ -2.07
RTT101YJL047C PDR16P53860 351 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C INN1P53901 409 aa2.13□□□□□ -2.07
RTT101YJL047C ORC4P54791 529 aa2.13□□□□□ -2.07
RTT101YJL047C DAK1P54838 584 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C SDH1Q00711 640 aa2.13□□□□□ -2.07
RTT101YJL047C RRN5Q02983 363 aa2.13□□□□□ -2.07
RTT101YJL047C ABZ2Q03266 374 aa2.13□□□□□ -2.07
RTT101YJL047C GIS4Q04233 774 aa2.13□□□□□ -2.07
RTT101YJL047C DBP9Q06218 594 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C VPS36Q06696 566 aa2.13□□□□□ -2.07
RTT101YJL047C VAM6Q07468 1049 aa2.13□□□□□ -2.07
RTT101YJL047C AFI1Q99222 893 aa2.13□□□□□ -2.07
RTT101YJL047C SOD2P00447 233 aa2.13□□□□□ -2.07
RTT101YJL047C ARO3P14843 370 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C EST1P17214 699 aaPredicted RBP2.13□□□□□ -2.07
RTT101YJL047C GRR1P24814 1151 aa2.13□□□□□ -2.07
RTT101YJL047C SSE1P32589 693 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C SRP101P32916 621 aa2.13□□□□□ -2.07
RTT101YJL047C ECM21P38167 1117 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C YBL029WP38201 376 aa2.13□□□□□ -2.07
RTT101YJL047C APN2P38207 520 aa2.13□□□□□ -2.07
RTT101YJL047C YHR054CP38780 354 aa2.13□□□□□ -2.07
RTT101YJL047C MPT5P39016 859 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RTT101YJL047C GIP2P40036 548 aa2.13□□□□□ -2.07
RTT101YJL047C YNL195CP40168 261 aa2.13□□□□□ -2.07
RTT101YJL047C TED1P40533 473 aa2.13□□□□□ -2.07
RTT101YJL047C GSM1P42950 618 aa2.13□□□□□ -2.07
RTT101YJL047C ENP2P48234 707 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C YDL183CP48569 320 aa2.13□□□□□ -2.07
RTT101YJL047C TAF4P50105 388 aa2.13□□□□□ -2.07
RTT101YJL047C NUP84P52891 726 aa2.13□□□□□ -2.07
RTT101YJL047C ALT2P52892 507 aa2.13□□□□□ -2.07
RTT101YJL047C NAM8Q00539 523 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C RPA49Q01080 415 aaPredicted RBP2.13□□□□□ -2.07
RTT101YJL047C NGL2Q03264 515 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C TY1A-DR2Q03964 440 aaKnown RBP2.13□□□□□ -2.07
RTT101YJL047C CRD1Q07560 283 aa2.13□□□□□ -2.07
RTT101YJL047C ELG1Q12050 791 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms