RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YHL012WP38709 493 aa3.65□□□□□ -1.83
SSM4YIL030C SIT1P39980 628 aa3.65□□□□□ -1.83
SSM4YIL030C FTR1P40088 404 aa3.65□□□□□ -1.83
SSM4YIL030C PET130P47065 347 aa3.65□□□□□ -1.83
SSM4YIL030C MKC7P53379 596 aa3.65□□□□□ -1.83
SSM4YIL030C ORC3P54790 616 aa3.65□□□□□ -1.83
SSM4YIL030C YEH2Q07950 538 aa3.65□□□□□ -1.83
SSM4YIL030C KEL3Q08979 651 aaPredicted RBP3.65□□□□□ -1.83
SSM4YIL030C RRD2Q12461 358 aa3.65□□□□□ -1.83
SSM4YIL030C HSH49Q99181 213 aaPredicted RBP3.65□□□□□ -1.83
SSM4YIL030C EFB1P32471 206 aaKnown RBP3.65□□□□□ -1.83
SSM4YIL030C SMF2P38778 549 aa3.65□□□□□ -1.83
SSM4YIL030C YDR089WP38966 869 aa3.65□□□□□ -1.83
SSM4YIL030C FAA3P39002 694 aa3.65□□□□□ -1.83
SSM4YIL030C RTA1P53047 317 aa3.65□□□□□ -1.83
SSM4YIL030C DOT1Q04089 582 aaKnown RBP3.65□□□□□ -1.83
SSM4YIL030C OSW2Q12202 724 aa3.65□□□□□ -1.83
SSM4YIL030C HTZ1Q12692 134 aaKnown RBP3.65□□□□□ -1.83
SSM4YIL030C IZH4Q99393 312 aa3.65□□□□□ -1.83
SSM4YIL030C MRP13P12686 339 aa3.64□□□□□ -1.83
SSM4YIL030C THI4P32318 326 aa3.64□□□□□ -1.83
SSM4YIL030C ATG19P35193 415 aa3.64□□□□□ -1.83
SSM4YIL030C FMP32P43557 207 aa3.64□□□□□ -1.83
SSM4YIL030C HUL5P53119 910 aa3.64□□□□□ -1.83
SSM4YIL030C CSM3Q04659 317 aa3.64□□□□□ -1.83
SSM4YIL030C PAB1P04147 577 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SSM4YIL030C SPT3P06844 337 aa3.64□□□□□ -1.83
SSM4YIL030C MRF1P30775 413 aaPredicted RBP3.64□□□□□ -1.83
SSM4YIL030C SPT14P32363 452 aa3.64□□□□□ -1.83
SSM4YIL030C CYS4P32582 507 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C GPT2P36148 743 aa3.64□□□□□ -1.83
SSM4YIL030C CST26P38226 397 aa3.64□□□□□ -1.83
SSM4YIL030C PET100P38958 111 aa3.64□□□□□ -1.83
SSM4YIL030C RIC1P40395 1056 aa3.64□□□□□ -1.83
SSM4YIL030C BNA6P43619 295 aa3.64□□□□□ -1.83
SSM4YIL030C RPA14P50106 137 aa3.64□□□□□ -1.83
SSM4YIL030C SLD5Q03406 294 aa3.64□□□□□ -1.83
SSM4YIL030C YET3Q07451 203 aa3.64□□□□□ -1.83
SSM4YIL030C RIX7Q07844 837 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C CHS5Q12114 671 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C ZRT2Q12436 422 aa3.64□□□□□ -1.83
SSM4YIL030C SWI6P09959 803 aa3.64□□□□□ -1.83
SSM4YIL030C ERG6P25087 383 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C OXP1P28273 1286 aa3.64□□□□□ -1.83
SSM4YIL030C URA7P28274 579 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C SEC1P30619 724 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C SPR1P32603 445 aa3.64□□□□□ -1.83
SSM4YIL030C SLD2P34252 453 aa3.64□□□□□ -1.83
SSM4YIL030C VPS29P38759 282 aa3.64□□□□□ -1.83
SSM4YIL030C YHR045WP38775 560 aa3.64□□□□□ -1.83
SSM4YIL030C YEL020CP39994 560 aa3.64□□□□□ -1.83
SSM4YIL030C ASN1P49089 572 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C FMS1P50264 508 aa3.64□□□□□ -1.83
SSM4YIL030C DCP2P53550 970 aaKnown RBP3.64□□□□□ -1.83
SSM4YIL030C COG5P53951 403 aa3.64□□□□□ -1.83
SSM4YIL030C SLM2P53955 656 aa3.64□□□□□ -1.83
SSM4YIL030C YPL034WQ03083 165 aa3.64□□□□□ -1.83
SSM4YIL030C YPS7Q06325 596 aa3.64□□□□□ -1.83
SSM4YIL030C CFT2Q12102 859 aaPredicted RBP3.64□□□□□ -1.83
SSM4YIL030C TY1B-AO13527 1196 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C RHO1P06780 209 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C PUP2P32379 260 aa3.63□□□□□ -1.83
SSM4YIL030C YHR054CP38780 354 aa3.63□□□□□ -1.83
SSM4YIL030C RSC30P38781 883 aa3.63□□□□□ -1.83
SSM4YIL030C APE4P38821 490 aa3.63□□□□□ -1.83
SSM4YIL030C SER33P40510 469 aa3.63□□□□□ -1.83
SSM4YIL030C STE24P47154 453 aa3.63□□□□□ -1.83
SSM4YIL030C ZIP2P53061 704 aa3.63□□□□□ -1.83
SSM4YIL030C TPN1P53099 579 aa3.63□□□□□ -1.83
SSM4YIL030C IPI3P53877 555 aa3.63□□□□□ -1.83
SSM4YIL030C MUB1Q03162 620 aa3.63□□□□□ -1.83
SSM4YIL030C YMR111CQ04461 462 aaPredicted RBP3.63□□□□□ -1.83
SSM4YIL030C SUE1Q06524 206 aa3.63□□□□□ -1.83
SSM4YIL030C ENT4Q07872 247 aa3.63□□□□□ -1.83
SSM4YIL030C NTG2Q08214 380 aa3.63□□□□□ -1.83
SSM4YIL030C SGO1Q08490 590 aa3.63□□□□□ -1.83
SSM4YIL030C PUS7Q08647 676 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C MRPL25P23369 157 aa3.63□□□□□ -1.83
SSM4YIL030C SER1P33330 395 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C WHI3P34761 661 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C UBP13P38187 747 aa3.63□□□□□ -1.83
SSM4YIL030C PHO88P38264 188 aaPredicted RBP3.63□□□□□ -1.83
SSM4YIL030C OTU2P38747 307 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C ERV46P39727 415 aa3.63□□□□□ -1.83
SSM4YIL030C UBP6P43593 499 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C ATP22P50273 684 aaPredicted RBP3.63□□□□□ -1.83
SSM4YIL030C LIF1P53150 421 aa3.63□□□□□ -1.83
SSM4YIL030C YMR099CQ03161 297 aaKnown RBP3.63□□□□□ -1.83
SSM4YIL030C FMP45Q07651 309 aa3.63□□□□□ -1.83
SSM4YIL030C ERR1P0CX10 437 aa3.63□□□□□ -1.83
SSM4YIL030C ERR2P0CX11 437 aa3.63□□□□□ -1.83
SSM4YIL030C PTP2P29461 750 aa3.63□□□□□ -1.83
SSM4YIL030C BCS1P32839 456 aa3.63□□□□□ -1.83
SSM4YIL030C LIP5P32875 414 aa3.63□□□□□ -1.83
SSM4YIL030C FRT2P39734 528 aa3.63□□□□□ -1.83
SSM4YIL030C ERR3P42222 437 aa3.63□□□□□ -1.83
SSM4YIL030C AAD14P42884 376 aa3.63□□□□□ -1.83
SSM4YIL030C SNG1P46950 547 aa3.63□□□□□ -1.83
SSM4YIL030C SCW11P53189 542 aa3.63□□□□□ -1.83
SSM4YIL030C TWF1P53250 332 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms