RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeastyeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG9YHR190W IRC8P47046 822 aa3.94□□□□□ -1.78
ERG9YHR190W SCW4P53334 386 aaKnown RBP3.94□□□□□ -1.78
ERG9YHR190W MRPL1Q04599 285 aa3.94□□□□□ -1.78
ERG9YHR190W CRC1Q12289 327 aa3.94□□□□□ -1.78
ERG9YHR190W CDC5P32562 705 aa3.93□□□□□ -1.78
ERG9YHR190W ASK1P35734 292 aa3.93□□□□□ -1.78
ERG9YHR190W SDH8P38345 138 aa3.93□□□□□ -1.78
ERG9YHR190W PAF1P38351 445 aa3.93□□□□□ -1.78
ERG9YHR190W IRC7P43623 340 aa3.93□□□□□ -1.78
ERG9YHR190W SAE2P46946 345 aa3.93□□□□□ -1.78
ERG9YHR190W YLR111WQ12528 110 aa3.93□□□□□ -1.78
ERG9YHR190W YPR089WO13585 888 aa3.92□□□□□ -1.78
ERG9YHR190W INH1P01097 85 aa3.92□□□□□ -1.78
ERG9YHR190W PIF1P07271 859 aa3.92□□□□□ -1.78
ERG9YHR190W YAP1P19880 650 aaKnown RBP3.92□□□□□ -1.78
ERG9YHR190W EMP65P40085 556 aa3.92□□□□□ -1.78
ERG9YHR190W CIR1P42940 261 aa3.92□□□□□ -1.78
ERG9YHR190W IRC5P43610 853 aa3.92□□□□□ -1.78
ERG9YHR190W SLD3P53135 668 aa3.92□□□□□ -1.78
ERG9YHR190W SPC105P53148 917 aa3.92□□□□□ -1.78
ERG9YHR190W PIL1P53252 339 aaKnown RBP3.92□□□□□ -1.78
ERG9YHR190W HRD3Q05787 833 aa3.92□□□□□ -1.78
ERG9YHR190W PCL8Q08966 492 aa3.92□□□□□ -1.78
ERG9YHR190W HOS1Q12214 470 aa3.92□□□□□ -1.78
ERG9YHR190W SPT7P35177 1332 aa3.91□□□□□ -1.78
ERG9YHR190W ATP12P22135 325 aa3.91□□□□□ -1.78
ERG9YHR190W YJU2P28320 278 aaPredicted RBP3.91□□□□□ -1.78
ERG9YHR190W GPP2P40106 250 aaKnown RBP3.91□□□□□ -1.78
ERG9YHR190W CFD1P40558 293 aa3.91□□□□□ -1.78
ERG9YHR190W COG2P53271 262 aa3.91□□□□□ -1.78
ERG9YHR190W HOL1P53389 586 aa3.91□□□□□ -1.78
ERG9YHR190W AAT1Q01802 451 aa3.91□□□□□ -1.78
ERG9YHR190W MDM1Q01846 1127 aa3.91□□□□□ -1.78
ERG9YHR190W TFC4P33339 1025 aa3.9□□□□□ -1.79
ERG9YHR190W BLI1P35727 113 aa3.9□□□□□ -1.79
ERG9YHR190W LNP1P38878 278 aa3.9□□□□□ -1.79
ERG9YHR190W SSP120P39931 234 aaKnown RBP3.9□□□□□ -1.79
ERG9YHR190W MAM1P40065 302 aa3.9□□□□□ -1.79
ERG9YHR190W PEX14P53112 341 aa3.9□□□□□ -1.79
ERG9YHR190W ESF2P53743 316 aaKnown RBP3.9□□□□□ -1.79
ERG9YHR190W TRE2Q08693 809 aa3.9□□□□□ -1.79
ERG9YHR190W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
ERG9YHR190W CET1O13297 549 aaPredicted RBP3.89□□□□□ -1.79
ERG9YHR190W PGI1P12709 554 aaKnown RBP3.89□□□□□ -1.79
ERG9YHR190W GFD2P25370 566 aaKnown RBP3.89□□□□□ -1.79
ERG9YHR190W MGM1P32266 881 aa3.89□□□□□ -1.79
ERG9YHR190W SER1P33330 395 aaKnown RBP3.89□□□□□ -1.79
ERG9YHR190W MTG2P38860 518 aa3.89□□□□□ -1.79
ERG9YHR190W YMR124WP39523 943 aaKnown RBP3.89□□□□□ -1.79
ERG9YHR190W YIL024CP40543 189 aa3.89□□□□□ -1.79
ERG9YHR190W MNT2P53059 558 aa3.89□□□□□ -1.79
ERG9YHR190W YNL034WP53963 612 aa3.89□□□□□ -1.79
ERG9YHR190W TGL2P54857 326 aa3.89□□□□□ -1.79
ERG9YHR190W CYK3Q07533 885 aa3.89□□□□□ -1.79
ERG9YHR190W CWC2Q12046 339 aaPredicted RBP3.89□□□□□ -1.79
ERG9YHR190W PNO1Q99216 274 aaKnown RBP3.89□□□□□ -1.79
ERG9YHR190W ILS1P09436 1072 aaKnown RBP3.88□□□□□ -1.79
ERG9YHR190W YMR085WP0CF18 432 aa3.88□□□□□ -1.79
ERG9YHR190W SST2P11972 698 aaKnown RBP3.88□□□□□ -1.79
ERG9YHR190W OPI1P21957 404 aa3.88□□□□□ -1.79
ERG9YHR190W DAL3P32459 195 aa3.88□□□□□ -1.79
ERG9YHR190W PET309P32522 965 aaPredicted RBP3.88□□□□□ -1.79
ERG9YHR190W NFU1P32860 256 aa3.88□□□□□ -1.79
ERG9YHR190W MRS6P32864 603 aaKnown RBP3.88□□□□□ -1.79
ERG9YHR190W IES5P40060 125 aa3.88□□□□□ -1.79
ERG9YHR190W MEP2P41948 499 aa3.88□□□□□ -1.79
ERG9YHR190W COG6P53959 839 aa3.88□□□□□ -1.79
ERG9YHR190W RAD33Q04231 177 aa3.88□□□□□ -1.79
ERG9YHR190W TDA9Q04545 1251 aa3.88□□□□□ -1.79
ERG9YHR190W SNU66Q12420 587 aaPredicted RBP3.88□□□□□ -1.79
ERG9YHR190W CHO2P05374 869 aaKnown RBP3.87□□□□□ -1.79
ERG9YHR190W ATP4P05626 244 aa3.87□□□□□ -1.79
ERG9YHR190W COX11P19516 300 aaKnown RBP3.87□□□□□ -1.79
ERG9YHR190W COQ3P27680 312 aa3.87□□□□□ -1.79
ERG9YHR190W PLC1P32383 869 aa3.87□□□□□ -1.79
ERG9YHR190W GDA1P32621 518 aa3.87□□□□□ -1.79
ERG9YHR190W PXL1P36166 706 aa3.87□□□□□ -1.79
ERG9YHR190W EXO84P38261 753 aa3.87□□□□□ -1.79
ERG9YHR190W STL1P39932 569 aa3.87□□□□□ -1.79
ERG9YHR190W NIT2P47016 307 aa3.87□□□□□ -1.79
ERG9YHR190W LSC1P53598 329 aaKnown RBP3.87□□□□□ -1.79
ERG9YHR190W COP1P53622 1201 aaKnown RBP3.87□□□□□ -1.79
ERG9YHR190W FOB1O13329 566 aa3.86□□□□□ -1.79
ERG9YHR190W APA1P16550 321 aaKnown RBP3.86□□□□□ -1.79
ERG9YHR190W ARG1P22768 420 aa3.86□□□□□ -1.79
ERG9YHR190W TFC3P34111 1160 aa3.86□□□□□ -1.79
ERG9YHR190W YBR071WP38243 211 aa3.86□□□□□ -1.79
ERG9YHR190W IDS2P46958 469 aa3.86□□□□□ -1.79
ERG9YHR190W COS12P53053 380 aa3.86□□□□□ -1.79
ERG9YHR190W UBX4P54730 416 aa3.86□□□□□ -1.79
ERG9YHR190W SNU56Q03782 492 aaKnown RBP3.86□□□□□ -1.79
ERG9YHR190W NUP53Q03790 475 aa3.86□□□□□ -1.79
ERG9YHR190W PEX15Q08215 383 aa3.86□□□□□ -1.79
ERG9YHR190W YOR389WQ08912 624 aa3.86□□□□□ -1.79
ERG9YHR190W HER1Q12276 1246 aa3.86□□□□□ -1.79
ERG9YHR190W GAL1P04385 528 aa3.85□□□□□ -1.79
ERG9YHR190W SSH4P32343 579 aa3.85□□□□□ -1.79
ERG9YHR190W JNM1P36224 373 aa3.85□□□□□ -1.79
ERG9YHR190W TAF5P38129 798 aa3.85□□□□□ -1.79
ERG9YHR190W FTH1P38310 465 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms