RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W MTG2P38860 518 aa3.22□□□□□ -1.89
SSF1YHR066W MAM1P40065 302 aa3.22□□□□□ -1.89
SSF1YHR066W ATG36P46983 293 aa3.22□□□□□ -1.89
SSF1YHR066W BNA3P47039 444 aaKnown RBP3.22□□□□□ -1.89
SSF1YHR066W ATP23P53722 227 aa3.22□□□□□ -1.89
SSF1YHR066W ESF2P53743 316 aaKnown RBP3.22□□□□□ -1.89
SSF1YHR066W EIS1Q05050 843 aaKnown RBP3.22□□□□□ -1.89
SSF1YHR066W YDL242WQ07746 117 aa3.22□□□□□ -1.89
SSF1YHR066W YOL057WQ08225 711 aa3.22□□□□□ -1.89
SSF1YHR066W RDL1Q12305 139 aaKnown RBP3.22□□□□□ -1.89
SSF1YHR066W YLR111WQ12528 110 aa3.22□□□□□ -1.89
SSF1YHR066W YER175W-AQ8TGU4 54 aa3.22□□□□□ -1.89
SSF1YHR066W APM3P38153 483 aa3.21□□□□□ -1.9
SSF1YHR066W SPC72P39723 622 aa3.21□□□□□ -1.9
SSF1YHR066W SAP1P39955 897 aaKnown RBP3.21□□□□□ -1.9
SSF1YHR066W LAS21P40367 830 aa3.21□□□□□ -1.9
SSF1YHR066W XBP1P40489 647 aa3.21□□□□□ -1.9
SSF1YHR066W COG2P53271 262 aa3.21□□□□□ -1.9
SSF1YHR066W YML053CQ04978 212 aa3.21□□□□□ -1.9
SSF1YHR066W SPN1Q06505 410 aaPredicted RBP3.21□□□□□ -1.9
SSF1YHR066W BSP1Q06604 576 aa3.21□□□□□ -1.9
SSF1YHR066W HIM1Q06674 414 aa3.21□□□□□ -1.9
SSF1YHR066W YAP7Q08182 245 aa3.21□□□□□ -1.9
SSF1YHR066W PIF1P07271 859 aa3.2□□□□□ -1.9
SSF1YHR066W KGD2P19262 463 aaPredicted RBP3.2□□□□□ -1.9
SSF1YHR066W MAK32P23060 363 aa3.2□□□□□ -1.9
SSF1YHR066W SWI4P25302 1093 aaKnown RBP3.2□□□□□ -1.9
SSF1YHR066W BEM3P32873 1128 aa3.2□□□□□ -1.9
SSF1YHR066W APD1P38281 316 aa3.2□□□□□ -1.9
SSF1YHR066W LNP1P38878 278 aa3.2□□□□□ -1.9
SSF1YHR066W IOC4Q04213 475 aa3.2□□□□□ -1.9
SSF1YHR066W ICT1Q12385 394 aa3.2□□□□□ -1.9
SSF1YHR066W PNO1Q99216 274 aaKnown RBP3.2□□□□□ -1.9
SSF1YHR066W RTC1Q08281 1341 aa3.19□□□□□ -1.9
SSF1YHR066W ADE3P07245 946 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W POL3P15436 1097 aa3.19□□□□□ -1.9
SSF1YHR066W RIT1P23796 513 aa3.19□□□□□ -1.9
SSF1YHR066W MCM3P24279 971 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W IMD2P38697 523 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W YHL041WP38730 149 aa3.19□□□□□ -1.9
SSF1YHR066W LTP1P40347 161 aa3.19□□□□□ -1.9
SSF1YHR066W RAD26P40352 1085 aa3.19□□□□□ -1.9
SSF1YHR066W NMD5P46970 1048 aa3.19□□□□□ -1.9
SSF1YHR066W BPL1P48445 690 aaPredicted RBP3.19□□□□□ -1.9
SSF1YHR066W IMD3P50095 523 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W CPR6P53691 371 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W RSC9Q03124 581 aa3.19□□□□□ -1.9
SSF1YHR066W PLM2Q04383 521 aa3.19□□□□□ -1.9
SSF1YHR066W ORM2Q06144 216 aa3.19□□□□□ -1.9
SSF1YHR066W RAD34Q06665 692 aa3.19□□□□□ -1.9
SSF1YHR066W IWR1Q07532 353 aaPredicted RBP3.19□□□□□ -1.9
SSF1YHR066W RRP6Q12149 733 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W NYV1Q12255 253 aa3.19□□□□□ -1.9
SSF1YHR066W PRS5Q12265 496 aaKnown RBP3.19□□□□□ -1.9
SSF1YHR066W SES1P07284 462 aaKnown RBP3.18□□□□□ -1.9
SSF1YHR066W YEF3P16521 1044 aaKnown RBP3.18□□□□□ -1.9
SSF1YHR066W SEC18P18759 758 aaKnown RBP3.18□□□□□ -1.9
SSF1YHR066W KES1P35844 434 aaKnown RBP3.18□□□□□ -1.9
SSF1YHR066W CAB2P40506 365 aa3.18□□□□□ -1.9
SSF1YHR066W ULP2P40537 1034 aaPredicted RBP3.18□□□□□ -1.9
SSF1YHR066W TAN1P53072 289 aaPredicted RBP3.18□□□□□ -1.9
SSF1YHR066W IRC3Q06683 689 aa3.18□□□□□ -1.9
SSF1YHR066W MSH1P25846 959 aa3.17□□□□□ -1.9
SSF1YHR066W YBR138CP38277 524 aa3.17□□□□□ -1.9
SSF1YHR066W ERC1P38767 581 aa3.17□□□□□ -1.9
SSF1YHR066W RPT2P40327 437 aaKnown RBP3.17□□□□□ -1.9
SSF1YHR066W NET1P47035 1189 aa3.17□□□□□ -1.9
SSF1YHR066W TAM41P53230 385 aa3.17□□□□□ -1.9
SSF1YHR066W TPO3Q06451 622 aa3.17□□□□□ -1.9
SSF1YHR066W SUL2Q12325 893 aa3.17□□□□□ -1.9
SSF1YHR066W YBR255C-AQ3E776 120 aa3.17□□□□□ -1.9
SSF1YHR066W BI2P03873 423 aa3.16□□□□□ -1.9
SSF1YHR066W APA1P16550 321 aaKnown RBP3.16□□□□□ -1.9
SSF1YHR066W PDE1P22434 369 aa3.16□□□□□ -1.9
SSF1YHR066W URE2P23202 354 aaKnown RBP3.16□□□□□ -1.9
SSF1YHR066W PTP1P25044 335 aa3.16□□□□□ -1.9
SSF1YHR066W ARP2P32381 391 aaKnown RBP3.16□□□□□ -1.9
SSF1YHR066W FTH1P38310 465 aa3.16□□□□□ -1.9
SSF1YHR066W VBA2P38358 474 aaKnown RBP3.16□□□□□ -1.9
SSF1YHR066W UBP7P40453 1071 aa3.16□□□□□ -1.9
SSF1YHR066W CIR1P42940 261 aa3.16□□□□□ -1.9
SSF1YHR066W YJR008WP47085 338 aa3.16□□□□□ -1.9
SSF1YHR066W NPA3P47122 385 aa3.16□□□□□ -1.9
SSF1YHR066W YPL071CQ02864 156 aa3.16□□□□□ -1.9
SSF1YHR066W LYS21Q12122 440 aaKnown RBP3.16□□□□□ -1.9
SSF1YHR066W CET1O13297 549 aaPredicted RBP3.15□□□□□ -1.9
SSF1YHR066W MIS1P09440 975 aaKnown RBP3.15□□□□□ -1.9
SSF1YHR066W YMR085WP0CF18 432 aa3.15□□□□□ -1.9
SSF1YHR066W BIK1P11709 440 aa3.15□□□□□ -1.9
SSF1YHR066W URK1P27515 501 aa3.15□□□□□ -1.9
SSF1YHR066W GSH1P32477 678 aa3.15□□□□□ -1.9
SSF1YHR066W ECM32P32644 1121 aaKnown RBP3.15□□□□□ -1.9
SSF1YHR066W RPF2P36160 344 aaKnown RBP3.15□□□□□ -1.9
SSF1YHR066W ERV46P39727 415 aa3.15□□□□□ -1.9
SSF1YHR066W BUD16P39988 312 aa3.15□□□□□ -1.9
SSF1YHR066W PUG1P40100 303 aa3.15□□□□□ -1.9
SSF1YHR066W CIN1P40987 1014 aa3.15□□□□□ -1.9
SSF1YHR066W PSA1P41940 361 aaKnown RBP3.15□□□□□ -1.9
SSF1YHR066W SNO3P43544 222 aa3.15□□□□□ -1.9
SSF1YHR066W IMA1P53051 589 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms