RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C PKH2Q12236 1081 aaKnown RBP2.65□□□□□ -1.99
PRE4YFR050C YBR182C-AQ8TGU6 64 aa2.65□□□□□ -1.99
PRE4YFR050C FPR1P20081 114 aaKnown RBP2.64□□□□□ -1.99
PRE4YFR050C CHS3P29465 1165 aa2.64□□□□□ -1.99
PRE4YFR050C BUD2P33314 1104 aa2.64□□□□□ -1.99
PRE4YFR050C STO1P34160 861 aaKnown RBP2.64□□□□□ -1.99
PRE4YFR050C YKL050CP35736 922 aa2.64□□□□□ -1.99
PRE4YFR050C MGS1P40151 587 aa2.64□□□□□ -1.99
PRE4YFR050C BUD6P41697 788 aa2.64□□□□□ -1.99
PRE4YFR050C PFA3P42836 336 aa2.64□□□□□ -1.99
PRE4YFR050C BUL1P48524 976 aa2.64□□□□□ -1.99
PRE4YFR050C TIM44Q01852 431 aa2.64□□□□□ -1.99
PRE4YFR050C NRG1Q03125 231 aa2.64□□□□□ -1.99
PRE4YFR050C POB3Q04636 552 aaKnown RBP2.64□□□□□ -1.99
PRE4YFR050C FPR4Q06205 392 aaPredicted RBP2.64□□□□□ -1.99
PRE4YFR050C THI22Q06490 572 aa2.64□□□□□ -1.99
PRE4YFR050C THI21Q08975 551 aa2.64□□□□□ -1.99
PRE4YFR050C PCD1Q12524 340 aa2.64□□□□□ -1.99
PRE4YFR050C YLR415CO13578 112 aa2.63□□□□□ -1.99
PRE4YFR050C MET6P05694 767 aaKnown RBP2.63□□□□□ -1.99
PRE4YFR050C ALG7P07286 448 aa2.63□□□□□ -1.99
PRE4YFR050C CIT2P08679 460 aa2.63□□□□□ -1.99
PRE4YFR050C SPO11P23179 398 aa2.63□□□□□ -1.99
PRE4YFR050C VBA3P25594 458 aa2.63□□□□□ -1.99
PRE4YFR050C CCR4P31384 837 aaKnown RBP2.63□□□□□ -1.99
PRE4YFR050C PPG1P32838 368 aa2.63□□□□□ -1.99
PRE4YFR050C PFS1P38872 237 aa2.63□□□□□ -1.99
PRE4YFR050C DOT6P40059 670 aaKnown RBP2.63□□□□□ -1.99
PRE4YFR050C TIF34P40217 347 aaKnown RBP2.63□□□□□ -1.99
PRE4YFR050C YJR008WP47085 338 aa2.63□□□□□ -1.99
PRE4YFR050C UBA2P52488 636 aa2.63□□□□□ -1.99
PRE4YFR050C ZIP2P53061 704 aa2.63□□□□□ -1.99
PRE4YFR050C NPY1P53164 384 aa2.63□□□□□ -1.99
PRE4YFR050C YNL134CP53912 376 aaKnown RBP2.63□□□□□ -1.99
PRE4YFR050C GLO2Q05584 274 aa2.63□□□□□ -1.99
PRE4YFR050C YOL024WQ08172 172 aa2.63□□□□□ -1.99
PRE4YFR050C FRE5Q08908 694 aa2.63□□□□□ -1.99
PRE4YFR050C CDC9P04819 755 aa2.62□□□□□ -1.99
PRE4YFR050C ATP1P07251 545 aaKnown RBP2.62□□□□□ -1.99
PRE4YFR050C PPR1P07272 904 aaPredicted RBP2.62□□□□□ -1.99
PRE4YFR050C PRP4P20053 465 aaKnown RBP2.62□□□□□ -1.99
PRE4YFR050C BEM1P29366 551 aa2.62□□□□□ -1.99
PRE4YFR050C MTC2P34246 357 aa2.62□□□□□ -1.99
PRE4YFR050C DID4P36108 232 aa2.62□□□□□ -1.99
PRE4YFR050C DAS1P47005 663 aa2.62□□□□□ -1.99
PRE4YFR050C HXT16P47185 567 aa2.62□□□□□ -1.99
PRE4YFR050C AMA1P50082 593 aa2.62□□□□□ -1.99
PRE4YFR050C MUP1P50276 574 aa2.62□□□□□ -1.99
PRE4YFR050C ALT2P52892 507 aa2.62□□□□□ -1.99
PRE4YFR050C MAL11P53048 616 aa2.62□□□□□ -1.99
PRE4YFR050C MRPS35P53292 345 aa2.62□□□□□ -1.99
PRE4YFR050C SLI1P53304 468 aa2.62□□□□□ -1.99
PRE4YFR050C ERG5P54781 538 aa2.62□□□□□ -1.99
PRE4YFR050C OMS1Q06668 471 aa2.62□□□□□ -1.99
PRE4YFR050C MCH5Q08777 521 aa2.62□□□□□ -1.99
PRE4YFR050C ACF2Q12168 779 aa2.62□□□□□ -1.99
PRE4YFR050C MDM12Q92328 271 aa2.62□□□□□ -1.99
PRE4YFR050C UBC1P21734 215 aaKnown RBP2.61□□□□□ -1.99
PRE4YFR050C MEF1P25039 761 aa2.61□□□□□ -1.99
PRE4YFR050C ERG6P25087 383 aaKnown RBP2.61□□□□□ -1.99
PRE4YFR050C HIS7P33734 552 aaKnown RBP2.61□□□□□ -1.99
PRE4YFR050C PEX6P33760 1030 aa2.61□□□□□ -1.99
PRE4YFR050C OAR1P35731 278 aa2.61□□□□□ -1.99
PRE4YFR050C APT2P36973 181 aa2.61□□□□□ -1.99
PRE4YFR050C MOH1P38191 138 aa2.61□□□□□ -1.99
PRE4YFR050C YBR259WP38338 688 aa2.61□□□□□ -1.99
PRE4YFR050C SIC1P38634 284 aa2.61□□□□□ -1.99
PRE4YFR050C SET2P46995 733 aaKnown RBP2.61□□□□□ -1.99
PRE4YFR050C PAP2P53632 584 aaKnown RBP2.61□□□□□ -1.99
PRE4YFR050C ORC1P54784 914 aaPredicted RBP2.61□□□□□ -1.99
PRE4YFR050C ORC4P54791 529 aa2.61□□□□□ -1.99
PRE4YFR050C SNP1Q00916 300 aaPredicted RBP2.61□□□□□ -1.99
PRE4YFR050C UGO1Q03327 502 aa2.61□□□□□ -1.99
PRE4YFR050C GAD1Q04792 585 aa2.61□□□□□ -1.99
PRE4YFR050C YDR338CQ05497 695 aa2.61□□□□□ -1.99
PRE4YFR050C TRM13Q12383 476 aa2.61□□□□□ -1.99
PRE4YFR050C SNU66Q12420 587 aaPredicted RBP2.61□□□□□ -1.99
PRE4YFR050C SRD1P09007 221 aa2.6□□□□□ -1.99
PRE4YFR050C HOG1P32485 435 aa2.6□□□□□ -1.99
PRE4YFR050C UBP11P36026 717 aa2.6□□□□□ -1.99
PRE4YFR050C PPS1P38148 807 aa2.6□□□□□ -1.99
PRE4YFR050C HSL7P38274 827 aa2.6□□□□□ -1.99
PRE4YFR050C CAF16P43569 289 aa2.6□□□□□ -1.99
PRE4YFR050C TY4A-JP47023 414 aa2.6□□□□□ -1.99
PRE4YFR050C PRP31P49704 494 aaPredicted RBP2.6□□□□□ -1.99
PRE4YFR050C STB4P50104 949 aa2.6□□□□□ -1.99
PRE4YFR050C TDA7P53882 636 aaPredicted RBP2.6□□□□□ -1.99
PRE4YFR050C PTA1Q01329 785 aaPredicted RBP2.6□□□□□ -1.99
PRE4YFR050C VHS1Q03785 461 aa2.6□□□□□ -1.99
PRE4YFR050C NHX1Q04121 633 aa2.6□□□□□ -1.99
PRE4YFR050C ASM4Q05166 528 aa2.6□□□□□ -1.99
PRE4YFR050C ADY4Q05955 493 aa2.6□□□□□ -1.99
PRE4YFR050C RPN7Q06103 429 aaKnown RBP2.6□□□□□ -1.99
PRE4YFR050C HBT1Q07653 1046 aaKnown RBP2.6□□□□□ -1.99
PRE4YFR050C YDR061WQ12298 539 aa2.6□□□□□ -1.99
PRE4YFR050C SSA3P09435 649 aaKnown RBP2.59□□□□□ -1.99
PRE4YFR050C LAT1P12695 482 aaKnown RBP2.59□□□□□ -1.99
PRE4YFR050C PPH22P23595 377 aa2.59□□□□□ -1.99
PRE4YFR050C RME1P32338 300 aaKnown RBP2.59□□□□□ -1.99
PRE4YFR050C YKR051WP36142 418 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 141.1 ms