RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A SWC7Q06707 132 aa9.46□□□□□ -0.9
LSB3YFR024C-A RSB1Q08417 382 aa9.46□□□□□ -0.9
LSB3YFR024C-A YLR046CQ12253 270 aa9.46□□□□□ -0.9
LSB3YFR024C-A MCM16Q12262 181 aa9.46□□□□□ -0.9
LSB3YFR024C-A MIH1P23748 554 aa9.45□□□□□ -0.9
LSB3YFR024C-A GEX1P25596 615 aa9.45□□□□□ -0.9
LSB3YFR024C-A PAP1P29468 568 aaKnown RBP9.45□□□□□ -0.9
LSB3YFR024C-A PYC2P32327 1180 aaKnown RBP9.45□□□□□ -0.9
LSB3YFR024C-A PXA2P34230 853 aa9.45□□□□□ -0.9
LSB3YFR024C-A GEX2P36173 615 aa9.45□□□□□ -0.9
LSB3YFR024C-A YHL041WP38730 149 aa9.45□□□□□ -0.9
LSB3YFR024C-A PPE1P38796 400 aa9.45□□□□□ -0.9
LSB3YFR024C-A YMR134WP40207 237 aa9.45□□□□□ -0.9
LSB3YFR024C-A ATM1P40416 690 aa9.45□□□□□ -0.9
LSB3YFR024C-A AMA1P50082 593 aa9.45□□□□□ -0.9
LSB3YFR024C-A RIM8P53179 542 aa9.45□□□□□ -0.9
LSB3YFR024C-A YMR187CQ03236 431 aa9.45□□□□□ -0.9
LSB3YFR024C-A TDA9Q04545 1251 aa9.45□□□□□ -0.9
LSB3YFR024C-A ECI1Q05871 280 aa9.45□□□□□ -0.9
LSB3YFR024C-A ESC2Q06340 456 aa9.45□□□□□ -0.9
LSB3YFR024C-A YJU3P28321 313 aa9.44□□□□□ -0.9
LSB3YFR024C-A MRS6P32864 603 aaKnown RBP9.44□□□□□ -0.9
LSB3YFR024C-A SMF1P38925 575 aa9.44□□□□□ -0.9
LSB3YFR024C-A MAD1P40957 749 aa9.44□□□□□ -0.9
LSB3YFR024C-A RGD2P43556 714 aa9.44□□□□□ -0.9
LSB3YFR024C-A ROK1P45818 564 aaPredicted RBP9.44□□□□□ -0.9
LSB3YFR024C-A ASN2P49090 572 aaKnown RBP9.44□□□□□ -0.9
LSB3YFR024C-A TDA7P53882 636 aaPredicted RBP9.44□□□□□ -0.9
LSB3YFR024C-A PIR1Q03178 341 aa9.44□□□□□ -0.9
LSB3YFR024C-A YML053CQ04978 212 aa9.44□□□□□ -0.9
LSB3YFR024C-A NRT1Q08485 598 aa9.44□□□□□ -0.9
LSB3YFR024C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9 RIP-Chip
LSB3YFR024C-A PGC1Q08959 321 aa9.44□□□□□ -0.9
LSB3YFR024C-A PEX11Q12462 236 aa9.44□□□□□ -0.9
LSB3YFR024C-A SST2P11972 698 aaKnown RBP9.43□□□□□ -0.9
LSB3YFR024C-A MRPL8P22353 238 aa9.43□□□□□ -0.9
LSB3YFR024C-A PPX1P38698 397 aa9.43□□□□□ -0.9
LSB3YFR024C-A CKB2P38930 258 aa9.43□□□□□ -0.9
LSB3YFR024C-A MKT1P40850 830 aaKnown RBP9.43□□□□□ -0.9
LSB3YFR024C-A ALY2P47029 1046 aa9.43□□□□□ -0.9
LSB3YFR024C-A TRF5P48561 642 aaKnown RBP9.43□□□□□ -0.9
LSB3YFR024C-A AIM14P53109 570 aa9.43□□□□□ -0.9
LSB3YFR024C-A CWC24P53769 259 aa9.43□□□□□ -0.9
LSB3YFR024C-A PRM1P53835 661 aa9.43□□□□□ -0.9
LSB3YFR024C-A PEX13P80667 386 aa9.43□□□□□ -0.9
LSB3YFR024C-A CLU1Q03690 1277 aaKnown RBP9.43□□□□□ -0.9
LSB3YFR024C-A HPF1Q05164 967 aa9.43□□□□□ -0.9
LSB3YFR024C-A YBL029C-AQ3E756 94 aa9.43□□□□□ -0.9
LSB3YFR024C-A MSB2P32334 1306 aa9.42□□□□□ -0.9
LSB3YFR024C-A AAT2P23542 418 aaKnown RBP9.42□□□□□ -0.9
LSB3YFR024C-A YEL043WP32618 956 aa9.42□□□□□ -0.9
LSB3YFR024C-A LIP5P32875 414 aa9.42□□□□□ -0.9
LSB3YFR024C-A ECM2P38241 364 aaKnown RBP9.42□□□□□ -0.9
LSB3YFR024C-A MSG5P38590 489 aa9.42□□□□□ -0.9
LSB3YFR024C-A IST3P40565 148 aaPredicted RBP9.42□□□□□ -0.9
LSB3YFR024C-A CAF120P53836 1060 aa9.42□□□□□ -0.9
LSB3YFR024C-A ORC3P54790 616 aa9.42□□□□□ -0.9
LSB3YFR024C-A MSH6Q03834 1242 aa9.42□□□□□ -0.9
LSB3YFR024C-A URH1Q04179 340 aa9.42□□□□□ -0.9
LSB3YFR024C-A MFB1Q04922 465 aa9.42□□□□□ -0.9
LSB3YFR024C-A PER33Q12144 273 aa9.42□□□□□ -0.9
LSB3YFR024C-A OCA6Q12454 224 aa9.42□□□□□ -0.9
LSB3YFR024C-A AI5_ALPHAQ9ZZX1 630 aa9.42□□□□□ -0.9
LSB3YFR024C-A TGL4P36165 910 aa9.41□□□□□ -0.9
LSB3YFR024C-A GIP1P38229 639 aa9.41□□□□□ -0.9
LSB3YFR024C-A IML2P47031 731 aa9.41□□□□□ -0.9
LSB3YFR024C-A RPL34AP87262 121 aaPredicted RBP9.41□□□□□ -0.9
LSB3YFR024C-A BEM2P39960 2167 aaKnown RBP9.4□□□□□ -0.9
LSB3YFR024C-A QCR6P00127 147 aa9.4□□□□□ -0.9
LSB3YFR024C-A COX5AP00424 153 aa9.4□□□□□ -0.9
LSB3YFR024C-A PUF4P25339 888 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
LSB3YFR024C-A DPB3P27344 201 aa9.4□□□□□ -0.9
LSB3YFR024C-A YAT2P40017 923 aa9.4□□□□□ -0.9
LSB3YFR024C-A ELO3P40319 345 aa9.4□□□□□ -0.9
LSB3YFR024C-A IPI3P53877 555 aa9.4□□□□□ -0.9
LSB3YFR024C-A NMA111P53920 997 aa9.4□□□□□ -0.9
LSB3YFR024C-A RPL22BP56628 122 aaKnown RBP9.4□□□□□ -0.9
LSB3YFR024C-A VTI1Q04338 217 aa9.4□□□□□ -0.9
LSB3YFR024C-A LDB18Q07887 179 aa9.4□□□□□ -0.9
LSB3YFR024C-A CMS1Q07897 291 aaKnown RBP9.4□□□□□ -0.9
LSB3YFR024C-A AVL9Q12500 764 aa9.4□□□□□ -0.9
LSB3YFR024C-A TOR2P32600 2474 aaKnown RBP9.4□□□□□ -0.91
LSB3YFR024C-A RAD3P06839 778 aa9.39□□□□□ -0.91
LSB3YFR024C-A SCH9P11792 824 aaKnown RBP9.39□□□□□ -0.91
LSB3YFR024C-A SEC63P14906 663 aa9.39□□□□□ -0.91
LSB3YFR024C-A GCD6P32501 712 aaKnown RBP9.39□□□□□ -0.91
LSB3YFR024C-A GCG1P32656 232 aaKnown RBP9.39□□□□□ -0.91
LSB3YFR024C-A BYE1P36106 594 aa9.39□□□□□ -0.91
LSB3YFR024C-A POP4P38336 279 aa9.39□□□□□ -0.91
LSB3YFR024C-A REI1P38344 393 aaPredicted RBP9.39□□□□□ -0.91
LSB3YFR024C-A PIK1P39104 1066 aa9.39□□□□□ -0.91
LSB3YFR024C-A YPR003CP53394 754 aa9.39□□□□□ -0.91
LSB3YFR024C-A YNL035CP53962 389 aaKnown RBP9.39□□□□□ -0.91
LSB3YFR024C-A MET14Q02196 202 aa9.39□□□□□ -0.91
LSB3YFR024C-A UTP6Q02354 440 aaKnown RBP9.39□□□□□ -0.91
LSB3YFR024C-A ARP9Q05123 467 aa9.39□□□□□ -0.91
LSB3YFR024C-A YPR114WQ06107 315 aa9.39□□□□□ -0.91
LSB3YFR024C-A TRE2Q08693 809 aa9.39□□□□□ -0.91
LSB3YFR024C-A SFI1Q12369 946 aa9.39□□□□□ -0.91
LSB3YFR024C-A MNE1P24720 663 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 256.7 ms