RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C PSR2Q07949 397 aa3.71□□□□□ -1.82
VAB2YEL005C SSM4P40318 1319 aa3.7□□□□□ -1.82
VAB2YEL005C YMR084WA2P2R3 262 aa3.7□□□□□ -1.82
VAB2YEL005C ADE3P07245 946 aaKnown RBP3.7□□□□□ -1.82
VAB2YEL005C TUB1P09733 447 aaKnown RBP3.7□□□□□ -1.82
VAB2YEL005C PDE1P22434 369 aa3.7□□□□□ -1.82
VAB2YEL005C ADY2P25613 283 aa3.7□□□□□ -1.82
VAB2YEL005C YCR061WP25639 631 aa3.7□□□□□ -1.82
VAB2YEL005C PRP45P28004 379 aaPredicted RBP3.7□□□□□ -1.82
VAB2YEL005C DBF20P32328 564 aa3.7□□□□□ -1.82
VAB2YEL005C CDC5P32562 705 aa3.7□□□□□ -1.82
VAB2YEL005C EMP70P32802 667 aa3.7□□□□□ -1.82
VAB2YEL005C NUP120P35729 1037 aa3.7□□□□□ -1.82
VAB2YEL005C MAM1P40065 302 aa3.7□□□□□ -1.82
VAB2YEL005C SMK1P41808 388 aa3.7□□□□□ -1.82
VAB2YEL005C IML2P47031 731 aa3.7□□□□□ -1.82
VAB2YEL005C ESF2P53743 316 aaKnown RBP3.7□□□□□ -1.82
VAB2YEL005C MRPL13Q02204 264 aa3.7□□□□□ -1.82
VAB2YEL005C AIM6Q07716 390 aa3.7□□□□□ -1.82
VAB2YEL005C AHA1Q12449 350 aaKnown RBP3.7□□□□□ -1.82
VAB2YEL005C PET122P10355 254 aa3.69□□□□□ -1.82
VAB2YEL005C APA1P16550 321 aaKnown RBP3.69□□□□□ -1.82
VAB2YEL005C PFK2P16862 959 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
VAB2YEL005C FUI1P38196 639 aa3.69□□□□□ -1.82
VAB2YEL005C UME6P39001 836 aa3.69□□□□□ -1.82
VAB2YEL005C SPC72P39723 622 aa3.69□□□□□ -1.82
VAB2YEL005C PAC2P39937 518 aa3.69□□□□□ -1.82
VAB2YEL005C ARB1P40024 610 aaKnown RBP3.69□□□□□ -1.82
VAB2YEL005C ZAP1P47043 880 aa3.69□□□□□ -1.82
VAB2YEL005C YGL117WP53133 265 aa3.69□□□□□ -1.82
VAB2YEL005C YGR021WP53212 290 aa3.69□□□□□ -1.82
VAB2YEL005C BI2P03873 423 aa3.68□□□□□ -1.82
VAB2YEL005C RPL7AP05737 244 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C TRX2P22803 104 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C SWI4P25302 1093 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C AAD3P25612 363 aa3.68□□□□□ -1.82
VAB2YEL005C NPR3P38742 1146 aa3.68□□□□□ -1.82
VAB2YEL005C FSH1P38777 243 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C FUN12P39730 1002 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C PUG1P40100 303 aa3.68□□□□□ -1.82
VAB2YEL005C YJL043WP47053 257 aa3.68□□□□□ -1.82
VAB2YEL005C YNL058CP53947 316 aa3.68□□□□□ -1.82
VAB2YEL005C UBP16Q02863 499 aa3.68□□□□□ -1.82
VAB2YEL005C TRS130Q03660 1102 aa3.68□□□□□ -1.82
VAB2YEL005C EIS1Q05050 843 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C ICL2Q12031 575 aa3.68□□□□□ -1.82
VAB2YEL005C RPL7BQ12213 244 aaKnown RBP3.68□□□□□ -1.82
VAB2YEL005C YMC1P32331 307 aa3.67□□□□□ -1.82
VAB2YEL005C ARP2P32381 391 aaKnown RBP3.67□□□□□ -1.82
VAB2YEL005C FRD1P32614 470 aaKnown RBP3.67□□□□□ -1.82
VAB2YEL005C RPC34P32910 317 aa3.67□□□□□ -1.82
VAB2YEL005C RPT3P33298 428 aaKnown RBP3.67□□□□□ -1.82
VAB2YEL005C XRS2P33301 854 aa3.67□□□□□ -1.82
VAB2YEL005C RPF2P36160 344 aaKnown RBP3.67□□□□□ -1.82
VAB2YEL005C UBX6P47049 396 aa3.67□□□□□ -1.82
VAB2YEL005C IMA1P53051 589 aa3.67□□□□□ -1.82
VAB2YEL005C TPK1P06244 397 aa3.66□□□□□ -1.82
VAB2YEL005C PMA2P19657 947 aa3.66□□□□□ -1.82
VAB2YEL005C YCL049CP25577 312 aa3.66□□□□□ -1.82
VAB2YEL005C GDA1P32621 518 aa3.66□□□□□ -1.82
VAB2YEL005C PSY4P38193 441 aa3.66□□□□□ -1.82
VAB2YEL005C RAD26P40352 1085 aa3.66□□□□□ -1.82
VAB2YEL005C YIL161WP40449 235 aaKnown RBP3.66□□□□□ -1.82
VAB2YEL005C ERR3P42222 437 aa3.66□□□□□ -1.82
VAB2YEL005C YFL015CP43578 164 aa3.66□□□□□ -1.82
VAB2YEL005C MTG1Q03151 367 aaPredicted RBP3.66□□□□□ -1.82
VAB2YEL005C ARO10Q06408 635 aa3.66□□□□□ -1.82
VAB2YEL005C RVB2Q12464 471 aaKnown RBP3.66□□□□□ -1.82
VAB2YEL005C SEC3P33332 1336 aaKnown RBP3.66□□□□□ -1.82
VAB2YEL005C CHO2P05374 869 aaKnown RBP3.65□□□□□ -1.83
VAB2YEL005C ORC2P32833 620 aa3.65□□□□□ -1.83
VAB2YEL005C TEF4P36008 412 aaKnown RBP3.65□□□□□ -1.83
VAB2YEL005C YPT10P38146 199 aa3.65□□□□□ -1.83
VAB2YEL005C APD1P38281 316 aa3.65□□□□□ -1.83
VAB2YEL005C ARO9P38840 513 aaPredicted RBP3.65□□□□□ -1.83
VAB2YEL005C KAP123P40069 1113 aaKnown RBP3.65□□□□□ -1.83
VAB2YEL005C RPT2P40327 437 aaKnown RBP3.65□□□□□ -1.83
VAB2YEL005C CIR1P42940 261 aa3.65□□□□□ -1.83
VAB2YEL005C GTR1Q00582 310 aa3.65□□□□□ -1.83
VAB2YEL005C YMR018WQ04364 514 aa3.65□□□□□ -1.83
VAB2YEL005C PLM2Q04383 521 aa3.65□□□□□ -1.83
VAB2YEL005C ARG7Q04728 441 aa3.65□□□□□ -1.83
VAB2YEL005C YML053CQ04978 212 aa3.65□□□□□ -1.83
VAB2YEL005C ORM2Q06144 216 aa3.65□□□□□ -1.83
VAB2YEL005C IRC3Q06683 689 aa3.65□□□□□ -1.83
VAB2YEL005C CSR1Q06705 408 aaKnown RBP3.65□□□□□ -1.83
VAB2YEL005C YDL242WQ07746 117 aa3.65□□□□□ -1.83
VAB2YEL005C YBR255C-AQ3E776 120 aa3.65□□□□□ -1.83
VAB2YEL005C PNO1Q99216 274 aaKnown RBP3.65□□□□□ -1.83
VAB2YEL005C ILV2P07342 687 aaKnown RBP3.64□□□□□ -1.83
VAB2YEL005C HOM2P13663 365 aaKnown RBP3.64□□□□□ -1.83
VAB2YEL005C CNS1P33313 385 aa3.64□□□□□ -1.83
VAB2YEL005C SLC1P33333 303 aa3.64□□□□□ -1.83
VAB2YEL005C IES5P40060 125 aa3.64□□□□□ -1.83
VAB2YEL005C YML119WQ03208 357 aa3.64□□□□□ -1.83
VAB2YEL005C ECM16Q04217 1267 aaKnown RBP3.64□□□□□ -1.83
VAB2YEL005C YOR389WQ08912 624 aa3.64□□□□□ -1.83
VAB2YEL005C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
VAB2YEL005C AI5_ALPHAQ9ZZX1 630 aa3.64□□□□□ -1.83
VAB2YEL005C ATP2P00830 511 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 141.7 ms