RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W ORM1P53224 222 aa1.53□□□□□ -2.16
SPC110YDR356W NAF1P53919 492 aaKnown RBP1.53□□□□□ -2.16
SPC110YDR356W ROD1Q02805 837 aa1.53□□□□□ -2.16
SPC110YDR356W UME1Q03010 460 aa1.53□□□□□ -2.16
SPC110YDR356W YML131WQ03102 365 aa1.53□□□□□ -2.16
SPC110YDR356W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
SPC110YDR356W MGR3Q04472 501 aa1.53□□□□□ -2.16
SPC110YDR356W YDR286CQ05530 114 aa1.53□□□□□ -2.16
SPC110YDR356W VPS38Q05919 439 aa1.53□□□□□ -2.16
SPC110YDR356W YLR456WQ06199 204 aa1.53□□□□□ -2.16
SPC110YDR356W CDA1Q06702 301 aa1.53□□□□□ -2.16
SPC110YDR356W SYT1Q06836 1226 aa1.53□□□□□ -2.16
SPC110YDR356W VAM6Q07468 1049 aa1.53□□□□□ -2.16
SPC110YDR356W LUC7Q07508 261 aaPredicted RBP1.53□□□□□ -2.16
SPC110YDR356W NOP6Q07623 225 aaKnown RBP1.53□□□□□ -2.16
SPC110YDR356W HBT1Q07653 1046 aaKnown RBP1.53□□□□□ -2.16
SPC110YDR356W SHS1Q07657 551 aa1.53□□□□□ -2.16
SPC110YDR356W YPD1Q07688 167 aa1.53□□□□□ -2.16
SPC110YDR356W PML1Q07930 204 aaPredicted RBP1.53□□□□□ -2.16
SPC110YDR356W SMC5Q08204 1093 aa1.53□□□□□ -2.16
SPC110YDR356W TRE1Q08919 783 aa1.53□□□□□ -2.16
SPC110YDR356W YPL191CQ08930 360 aa1.53□□□□□ -2.16
SPC110YDR356W YPL272CQ08984 517 aa1.53□□□□□ -2.16
SPC110YDR356W PIN2Q12057 282 aa1.53□□□□□ -2.16
SPC110YDR356W PER33Q12144 273 aa1.53□□□□□ -2.16
SPC110YDR356W PTC5Q12511 572 aa1.53□□□□□ -2.16
SPC110YDR356W NCB2Q92317 146 aa1.53□□□□□ -2.16
SPC110YDR356W ULS1Q08562 1619 aa1.53□□□□□ -2.16
SPC110YDR356W SNT2P53127 1403 aa1.53□□□□□ -2.17
SPC110YDR356W QCR7P00128 127 aa1.53□□□□□ -2.17
SPC110YDR356W TDH1P00360 332 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W IPP1P00817 287 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W CDC37P06101 506 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W RPS6AP0CX37 236 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W RPS6BP0CX38 236 aaPredicted RBP1.53□□□□□ -2.17
SPC110YDR356W CDC24P11433 854 aaPredicted RBP1.53□□□□□ -2.17
SPC110YDR356W STE6P12866 1290 aa1.53□□□□□ -2.17
SPC110YDR356W RDS2P19541 446 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W PRI2P20457 528 aa1.53□□□□□ -2.17
SPC110YDR356W UTR1P21373 530 aa1.53□□□□□ -2.17
SPC110YDR356W BAS1P22035 811 aa1.53□□□□□ -2.17
SPC110YDR356W AEP2P22136 580 aa1.53□□□□□ -2.17
SPC110YDR356W ROX1P25042 368 aa1.53□□□□□ -2.17
SPC110YDR356W RPS5P26783 225 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W STO1P34160 861 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W AST1P35183 429 aa1.53□□□□□ -2.17
SPC110YDR356W PHO11P35842 467 aa1.53□□□□□ -2.17
SPC110YDR356W MCD4P36051 919 aa1.53□□□□□ -2.17
SPC110YDR356W NOP4P37838 685 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W YBL028CP38202 106 aa1.53□□□□□ -2.17
SPC110YDR356W PHO12P38693 467 aa1.53□□□□□ -2.17
SPC110YDR356W ECM1P39715 212 aa1.53□□□□□ -2.17
SPC110YDR356W AFG3P39925 761 aa1.53□□□□□ -2.17
SPC110YDR356W YEL025CP39991 1188 aa1.53□□□□□ -2.17
SPC110YDR356W FCY21P40039 528 aa1.53□□□□□ -2.17
SPC110YDR356W YJR054WP47114 497 aa1.53□□□□□ -2.17
SPC110YDR356W MOG1P47123 218 aa1.53□□□□□ -2.17
SPC110YDR356W FMS1P50264 508 aa1.53□□□□□ -2.17
SPC110YDR356W PSP1P50896 841 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W HFM1P51979 1187 aa1.53□□□□□ -2.17
SPC110YDR356W NUT1P53114 1132 aa1.53□□□□□ -2.17
SPC110YDR356W YGL114WP53134 725 aa1.53□□□□□ -2.17
SPC110YDR356W CUS2P53830 285 aaPredicted RBP1.53□□□□□ -2.17
SPC110YDR356W ALG11P53954 548 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W DID2P69771 204 aa1.53□□□□□ -2.17
SPC110YDR356W CDC55Q00362 526 aa1.53□□□□□ -2.17
SPC110YDR356W YPL113CQ02961 396 aa1.53□□□□□ -2.17
SPC110YDR356W PRP42Q03776 544 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W MSH6Q03834 1242 aa1.53□□□□□ -2.17
SPC110YDR356W TDA9Q04545 1251 aa1.53□□□□□ -2.17
SPC110YDR356W AIM32Q04689 311 aa1.53□□□□□ -2.17
SPC110YDR356W SOV1Q04748 898 aa1.53□□□□□ -2.17
SPC110YDR356W RSA3Q05942 220 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W THI7Q05998 598 aa1.53□□□□□ -2.17
SPC110YDR356W RGC1Q06108 1083 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W YCS4Q06156 1176 aa1.53□□□□□ -2.17
SPC110YDR356W MAG2Q06436 670 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W GUD1Q07729 489 aa1.53□□□□□ -2.17
SPC110YDR356W BUD20Q08004 166 aaPredicted RBP1.53□□□□□ -2.17
SPC110YDR356W DIS3Q08162 1001 aaKnown RBP1.53□□□□□ -2.17
SPC110YDR356W PGC1Q08959 321 aa1.53□□□□□ -2.17
SPC110YDR356W REX3Q12090 404 aa1.53□□□□□ -2.17
SPC110YDR356W ACF2Q12168 779 aa1.53□□□□□ -2.17
SPC110YDR356W YOL107WQ12239 342 aa1.53□□□□□ -2.17
SPC110YDR356W NTO1Q12311 748 aa1.53□□□□□ -2.17
SPC110YDR356W RMP1Q12530 201 aa1.53□□□□□ -2.17
SPC110YDR356W SNF2P22082 1703 aa1.52□□□□□ -2.17
SPC110YDR356W GCN4P03069 281 aa1.52□□□□□ -2.17
SPC110YDR356W CYT1P07143 309 aa1.52□□□□□ -2.17
SPC110YDR356W ENA1P13587 1091 aa1.52□□□□□ -2.17
SPC110YDR356W FBA1P14540 359 aaKnown RBP1.52□□□□□ -2.17
SPC110YDR356W PRP2P20095 876 aaPredicted RBP1.52□□□□□ -2.17
SPC110YDR356W KGD1P20967 1014 aaKnown RBP1.52□□□□□ -2.17
SPC110YDR356W SEC14P24280 304 aaKnown RBP1.52□□□□□ -2.17
SPC110YDR356W SNT1P25357 1226 aa1.52□□□□□ -2.17
SPC110YDR356W EMC1P25574 760 aa1.52□□□□□ -2.17
SPC110YDR356W IDH2P28241 369 aaKnown RBP1.52□□□□□ -2.17
SPC110YDR356W IDH1P28834 360 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
SPC110YDR356W CCR4P31384 837 aaKnown RBP1.52□□□□□ -2.17
SPC110YDR356W DBF20P32328 564 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms