RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 PSF2P40359 213 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 DPH1P40487 425 aaKnown RBP10.42□□□□□ -0.74
RDN18-1RDN18-1 NRD1P53617 575 aaKnown RBP RIP-Chip data10.42□□□□□ -0.74not detected
RDN18-1RDN18-1 RCF2P53721 224 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 TVP15Q03860 143 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 SPG3Q04398 127 aaPredicted RBP10.42□□□□□ -0.74
RDN18-1RDN18-1 TIF6Q12522 245 aaKnown RBP10.42□□□□□ -0.74
RDN18-1RDN18-1 TY4A-HQ6Q5P6 413 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 GFD2P25370 566 aaKnown RBP10.42□□□□□ -0.74
RDN18-1RDN18-1 TSC10P38342 320 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 GND2P53319 492 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 CDC123Q05791 360 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 SAM3Q08986 587 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 MAM3Q12296 706 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 LDB17Q12342 491 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 RPL24AP04449 155 aaKnown RBP10.41□□□□□ -0.74
RDN18-1RDN18-1 INO1P11986 533 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 HSP26P15992 214 aaKnown RBP RIP-Chip data10.41□□□□□ -0.74not detected
RDN18-1RDN18-1 BUD2P33314 1104 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 CTP1P38152 299 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 TRM5P38793 499 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 YEL028WP39989 153 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 RPS10BP46784 105 aaKnown RBP10.41□□□□□ -0.74
RDN18-1RDN18-1 AAD15Q08361 143 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 RPS10AQ08745 105 aaPredicted RBP10.41□□□□□ -0.74
RDN18-1RDN18-1 PKH2Q12236 1081 aaKnown RBP10.41□□□□□ -0.74
RDN18-1RDN18-1 ARP7Q12406 477 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 LDB19Q12502 818 aa10.41□□□□□ -0.74
RDN18-1RDN18-1 ERG20P08524 352 aaKnown RBP10.4□□□□□ -0.74
RDN18-1RDN18-1 YIH1P25637 258 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 HRR25P29295 494 aaKnown RBP10.4□□□□□ -0.74
RDN18-1RDN18-1 SMI1P32566 505 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 SIF2P38262 535 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 YHI9P38765 294 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 RAD55P38953 406 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 FIR1P40020 876 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 RRN7P40992 514 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 GUF1P46943 645 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 ASN2P49090 572 aaKnown RBP10.4□□□□□ -0.74
RDN18-1RDN18-1 ACL4Q03771 387 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 AIM32Q04689 311 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 ENT4Q07872 247 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 ESC8Q08119 714 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 YPR202WQ08993 238 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 HOS1Q12214 470 aa10.4□□□□□ -0.74
RDN18-1RDN18-1 MDM20Q12387 796 aaKnown RBP10.4□□□□□ -0.74
RDN18-1RDN18-1 MSD1P15179 658 aaKnown RBP10.4□□□□□ -0.75
RDN18-1RDN18-1 VAC17P25591 423 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 DGR2P32330 852 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 PHA2P32452 334 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 BEM3P32873 1128 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 NUP120P35729 1037 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 CRP1P38845 465 aaKnown RBP10.4□□□□□ -0.75
RDN18-1RDN18-1 ESL1P40456 1118 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 YFL040WP43562 540 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 CNN1P43618 361 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 TAF11Q04226 346 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 APC5Q08683 685 aa10.4□□□□□ -0.75
RDN18-1RDN18-1 VPS13Q07878 3144 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 GCY1P14065 312 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
RDN18-1RDN18-1 HSP60P19882 572 aaKnown RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 MEF1P25039 761 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 BUD14P27637 709 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 SIN4P32259 974 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 CUE2P36075 443 aaKnown RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 TGL4P36165 910 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 LAM1P38851 1228 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 FHL1P39521 936 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 MEF2P39677 819 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 RIO2P40160 425 aaKnown RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 HOS4P40480 1083 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 MIG2P53035 382 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 NOP15P53927 220 aaPredicted RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 YET2Q04210 160 aa10.39□□□□□ -0.75
RDN18-1RDN18-1 BUD20Q08004 166 aaPredicted RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 SPE3Q12074 293 aaKnown RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 CHS5Q12114 671 aaKnown RBP10.39□□□□□ -0.75
RDN18-1RDN18-1 YPR089WO13585 888 aa10.38□□□□□ -0.75
RDN18-1RDN18-1 APE1P14904 514 aa10.38□□□□□ -0.75
RDN18-1RDN18-1 ATG12P38316 186 aa10.38□□□□□ -0.75
RDN18-1RDN18-1 EDC3P39998 551 aaKnown RBP10.38□□□□□ -0.75
RDN18-1RDN18-1 JEM1P40358 645 aa10.38□□□□□ -0.75
RDN18-1RDN18-1 YIL001WP40560 513 aa10.38□□□□□ -0.75
RDN18-1RDN18-1 RSC2Q06488 889 aa10.38□□□□□ -0.75
RDN18-1RDN18-1 COX5AP00424 153 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 CCP1P00431 361 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 MPH2P0CD99 609 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 ADY2P25613 283 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 PEX5P35056 612 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 SRP68P38687 599 aaKnown RBP10.37□□□□□ -0.75
RDN18-1RDN18-1 DMA1P38823 416 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 SEC31P38968 1273 aaKnown RBP10.37□□□□□ -0.75
RDN18-1RDN18-1 XDJ1P39102 459 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 ARC1P46672 376 aaKnown RBP10.37□□□□□ -0.75
RDN18-1RDN18-1 SNG1P46950 547 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 YNL115CP53925 644 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 YDR476CQ03362 224 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 HFD1Q04458 532 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 FAR10Q06001 478 aa10.37□□□□□ -0.75
RDN18-1RDN18-1 SWC7Q06707 132 aa10.37□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms