RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 ARID3AQ99856 593 aa6.44□□□□□ -1.38
RPRD1B-209ENST00000622494 ABCC4O15439 1325 aa6.44□□□□□ -1.38
RPRD1B-209ENST00000622494 LRRC37AA6NMS7 1700 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 ERVV-1B6SEH8 477 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 NPR1P16066 1061 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 RHOQP17081 205 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 LMNB1P20700 586 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 HMGB2P26583 209 aaKnown RBP6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 GTF2E1P29083 439 aaPredicted RBP6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 SWI5Q1ZZU3 235 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 TMEM164Q5U3C3 297 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 TMEM214Q6NUQ4 689 aaKnown RBP6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 CLEC4GQ6UXB4 293 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 DLK2Q6UY11 383 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 SLC9A9Q8IVB4 645 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 NPAS3Q8IXF0 933 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 FAM89AQ96GI7 184 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 DDX21Q9NR30 783 aaKnown RBP eCLIP6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 ZNF652Q9Y2D9 606 aa6.43□□□□□ -1.38
RPRD1B-209ENST00000622494 RIC1Q4ADV7 1423 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 SCN9AQ15858 1988 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 WEE1P30291 646 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 LMOD3Q0VAK6 560 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 TEAD4Q15561 434 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 CRY2Q49AN0 593 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 TPTE2Q6XPS3 522 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 CCDC155Q8N6L0 562 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 ZDHHC1Q8WTX9 485 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 CELF1Q92879 486 aaKnown RBP6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 MYD88Q99836 296 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 NIFKQ9BYG3 293 aaKnown RBP6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 TSPAN10Q9H1Z9 355 aaPredicted RBP6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 TAOK3Q9H2K8 898 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 SEC31BQ9NQW1 1179 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 NXF1Q9UBU9 619 aaKnown RBP6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 DYRK1BQ9Y463 629 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 FANCIQ9NVI1 1328 aa6.42□□□□□ -1.38
RPRD1B-209ENST00000622494 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 HSPA6P17066 643 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 IGFBP4P22692 258 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 HIRAP54198 1017 aaPredicted RBP6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 TCIRG1Q13488 830 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 RPGRQ92834 1020 aaKnown RBP6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 YTHDC1Q96MU7 727 aaKnown RBP6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 ISCA1Q9BUE6 129 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 UTP14AQ9BVJ6 771 aaKnown RBP6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 KCNQ5Q9NR82 932 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 IFT57Q9NWB7 429 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 TRMT112Q9UI30 125 aaKnown RBP6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 RNF123Q5XPI4 1314 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 A0A1B0GUL6 1792 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 ADAMTSL1Q8N6G6 1762 aa6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 ZNF646O15015 1829 aaPredicted RBP6.41□□□□□ -1.38
RPRD1B-209ENST00000622494 A0A1B0GTH6 734 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 GLTPD2A6NH11 291 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 H3BM21 787 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 EML1O00423 815 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 PPFIA3O75145 1194 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 IGKV5-2P06315 115 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 HOXA10P31260 410 aaPredicted RBP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 HNRNPUQ00839 825 aaKnown RBP eCLIP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 FKBP4Q02790 459 aaKnown RBP eCLIP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 EXOSC9Q06265 439 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 AOC3Q16853 763 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 CWF19L2Q2TBE0 894 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 CCDC93Q567U6 631 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 CLP1Q92989 425 aaKnown RBP6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 TIMMDC1Q9NPL8 285 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 GJA3Q9Y6H8 435 aa6.4□□□□□ -1.38
RPRD1B-209ENST00000622494 IBTKQ9P2D0 1353 aaPredicted RBP6.4□□□□□ -1.39
RPRD1B-209ENST00000622494 MYH3P11055 1940 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 YDJCA8MPS7 323 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 F6X3S4 739 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 TOMM70O94826 608 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 NOS2P35228 1153 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 IARSP41252 1262 aaKnown RBP6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 PHKA2P46019 1235 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 PLA2G4AP47712 749 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 PSMA6P60900 246 aaKnown RBP6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 GNAI1P63096 354 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 GPSM2P81274 684 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 NFX1Q12986 1120 aaKnown RBP6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 OCLNQ16625 522 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 SLC10A5Q5PT55 438 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 TBCELQ5QJ74 424 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 DNAJC5GQ8N7S2 189 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 PLBD2Q8NHP8 589 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 C1orf216Q8TAB5 229 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 ZNF775Q96BV0 537 aaPredicted RBP6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 C2orf49Q9BVC5 232 aaPredicted RBP6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 NYXQ9GZU5 481 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 BABAM1Q9NWV8 329 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 ZDHHC3Q9NYG2 299 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 MAP3K2Q9Y2U5 619 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms