RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 NEURL4Q96JN8 1562 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 GRIA4P48058 902 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 PDE4CQ08493 712 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 ZNF423Q2M1K9 1284 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 SPRED3Q2MJR0 410 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 TXNDC2Q86VQ3 553 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 SHKBP1Q8TBC3 707 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 NLRP1Q9C000 1473 aa7.62□□□□□ -1.19
SVIP-202ENST00000525670 ARHGAP31Q2M1Z3 1444 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 SETD5Q9C0A6 1442 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 RXRBP28702 533 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 SGO2Q562F6 1265 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 USPL1Q5W0Q7 1092 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 NRSN2Q9GZP1 204 aa7.61□□□□□ -1.19
SVIP-202ENST00000525670 IQGAP1P46940 1657 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 CPNE3O75131 537 aaKnown RBP7.6□□□□□ -1.19
SVIP-202ENST00000525670 CYP11A1P05108 521 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 DRD2P14416 443 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 USP11P51784 963 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 SOX4Q06945 474 aaPredicted RBP7.6□□□□□ -1.19
SVIP-202ENST00000525670 GIMAP7Q8NHV1 300 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 ARID3AQ99856 593 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 ZFYVE1Q9HBF4 777 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 NOS1P29475 1434 aa7.6□□□□□ -1.19
SVIP-202ENST00000525670 WDR64B1ANS9 1081 aa7.59□□□□□ -1.19
SVIP-202ENST00000525670 DTX1Q86Y01 620 aa7.59□□□□□ -1.19
SVIP-202ENST00000525670 C2CD4AQ8NCU7 369 aaPredicted RBP7.59□□□□□ -1.19
SVIP-202ENST00000525670 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
SVIP-202ENST00000525670 MFSD14AQ96MC6 490 aa7.59□□□□□ -1.19
SVIP-202ENST00000525670 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
SVIP-202ENST00000525670 RPRD2Q5VT52 1461 aaKnown RBP7.59□□□□□ -1.19
SVIP-202ENST00000525670 TRPM2O94759 1503 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 PLA2R1Q13018 1463 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 KIF1BO60333 1816 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 FAM95CA0A1B0GW59 222 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 SPINK2P20155 84 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 MAOBP27338 520 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 ORC1Q13415 861 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 IDI1Q13907 227 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 HP1BP3Q5SSJ5 553 aaPredicted RBP7.58□□□□□ -1.2
SVIP-202ENST00000525670 PAOXQ6QHF9 649 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 DNAJC25Q9H1X3 360 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 EHD4Q9H223 541 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 TMEM131LA2VDJ0 1609 aa7.58□□□□□ -1.2
SVIP-202ENST00000525670 ZNF335Q9H4Z2 1342 aaPredicted RBP7.57□□□□□ -1.2
SVIP-202ENST00000525670 SCAF11Q99590 1463 aaKnown RBP7.57□□□□□ -1.2
SVIP-202ENST00000525670 B3GALT4O96024 378 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 ITPKAP23677 461 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 POU4F3Q15319 338 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 NFKBIBQ15653 356 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 CDPF1Q6NVV7 123 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
SVIP-202ENST00000525670 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 FBLIM1Q8WUP2 373 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 ATG3Q9NT62 314 aa7.57□□□□□ -1.2
SVIP-202ENST00000525670 NPHP4O75161 1426 aaPredicted RBP7.56□□□□□ -1.2
SVIP-202ENST00000525670 RIMS2Q9UQ26 1411 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
SVIP-202ENST00000525670 IGHA2P01877 340 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 ADH5P11766 374 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 GP2P55259 537 aaKnown RBP7.56□□□□□ -1.2
SVIP-202ENST00000525670 PTPN12Q05209 780 aaKnown RBP7.56□□□□□ -1.2
SVIP-202ENST00000525670 ZNF326Q5BKZ1 582 aaKnown RBP7.56□□□□□ -1.2
SVIP-202ENST00000525670 MCTP1Q6DN14 999 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
SVIP-202ENST00000525670 CCDC74AQ96AQ1 378 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 YIPF2Q9BWQ6 316 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 ZNF576Q9H609 170 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 NPHS2Q9NP85 383 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 PIM2Q9P1W9 311 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 STRCP1A6NGW2 1772 aa7.56□□□□□ -1.2
SVIP-202ENST00000525670 EIF1AYO14602 144 aaKnown RBP7.55□□□□□ -1.2
SVIP-202ENST00000525670 WNT11O96014 354 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 F13BP05160 661 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 CTSBP07858 339 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 LTKP29376 864 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 CPSF6Q16630 551 aaKnown RBP eCLIP7.55□□□□□ -1.2
SVIP-202ENST00000525670 FBXL6Q8N531 539 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 CORO1BQ9BR76 489 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 OAS3Q9Y6K5 1087 aaKnown RBP7.55□□□□□ -1.2
SVIP-202ENST00000525670 TMEM2Q9UHN6 1383 aa7.55□□□□□ -1.2
SVIP-202ENST00000525670 SLIT1O75093 1534 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 GPR182O15218 404 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 ADAMTS4O75173 837 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 ANKLE2Q86XL3 938 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
SVIP-202ENST00000525670 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 MPHOSPH9Q99550 1183 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 TRIM56Q9BRZ2 755 aaKnown RBP7.54□□□□□ -1.2
SVIP-202ENST00000525670 OSBPL1AQ9BXW6 950 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 RBCK1Q9BYM8 510 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 RAD18Q9NS91 495 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 ARHGAP23Q9P227 1491 aa7.54□□□□□ -1.2
SVIP-202ENST00000525670 KDM5AP29375 1690 aaKnown RBP7.54□□□□□ -1.2
SVIP-202ENST00000525670 CCDC144AA2RUR9 1427 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms