RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 SYNE4Q8N205 404 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 DEFB123Q8N688 67 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 ELOA3Q8NG57 546 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 ZNF296Q8WUU4 475 aaPredicted RBP6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 L3MBTL2Q969R5 705 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 KRTAP4-12Q9BQ66 201 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 KRTAP9-9Q9BYP9 154 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 PKD1L2Q7Z442 2459 aa6.81□□□□□ -1.32
RAB28P1-201ENST00000411517 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 EFSO43281 561 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 COL11A2P13942 1736 aaPredicted RBP6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 EN2P19622 333 aaPredicted RBP6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 CACNA1SQ13698 1873 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 NOM1Q5C9Z4 860 aaKnown RBP6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 RGMBQ6NW40 437 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 ZDHHC1Q8WTX9 485 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 ZNF358Q9NW07 568 aa6.8□□□□□ -1.32
RAB28P1-201ENST00000411517 SLX4Q8IY92 1834 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 SCO2A0A1W2PP80 73 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 FZD9O00144 591 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 ITGB7P26010 798 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 NOS2P35228 1153 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 NCOA4Q13772 614 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 DEPDC4Q8N2C3 294 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 SCHIP1Q9P0W5 487 aaPredicted RBP6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 SRP68Q9UHB9 627 aaKnown RBP6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 ANKRD31Q8N7Z5 1873 aa6.79□□□□□ -1.32
RAB28P1-201ENST00000411517 TMEM265A0A087WTH1 108 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 M0R082 166 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 ZNF417Q8TAU3 575 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 RHPN1Q8TCX5 695 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 RAPGEF4Q8WZA2 1011 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 IP6K1Q92551 441 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 ZNF622Q969S3 477 aaKnown RBP eCLIP6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 LTV1Q96GA3 475 aaPredicted RBP6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 CSRNP1Q96S65 589 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 ZNF587Q96SQ5 575 aaPredicted RBP6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 MTMR10Q9NXD2 777 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 PRUNE2Q8WUY3 3088 aa6.78□□□□□ -1.32
RAB28P1-201ENST00000411517 EYSQ5T1H1 3165 aa6.77□□□□□ -1.32
RAB28P1-201ENST00000411517 ITGAEP38570 1179 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 EPS15P42566 896 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 MCM6Q14566 821 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 TEAD4Q15561 434 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 SLC30A3Q99726 388 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 GLIS2Q9BZE0 524 aaPredicted RBP6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 TMOD3Q9NYL9 352 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 CACNA1GO43497 2377 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 CARMIL3Q8ND23 1372 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 MUC6Q6W4X9 2439 aa6.77□□□□□ -1.33
RAB28P1-201ENST00000411517 MON2Q7Z3U7 1717 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 SERTM1A2A2V5 107 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 CYP27B1O15528 508 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 SIN3BO75182 1162 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 ZNF157P51786 506 aaPredicted RBP6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 TBC1D8BQ0IIM8 1120 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 TRIM28Q13263 835 aaKnown RBP6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 NEUROD1Q13562 356 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 Q7L0L9 218 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 ARMC5Q96C12 935 aa6.76□□□□□ -1.33
RAB28P1-201ENST00000411517 USP17L5A8MUK1 530 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 EML1O00423 815 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 ALBP02768 609 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 SERPINB2P05120 415 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 PDE6BP35913 854 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 SPEM2Q0P670 501 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 NFIXQ14938 502 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 RSPO4Q2I0M5 234 aaPredicted RBP6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 PRPF40BQ6NWY9 871 aaKnown RBP6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 TPCN2Q8NHX9 752 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 HSH2DQ96JZ2 352 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 CEP63Q96MT8 703 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 ATG3Q9NT62 314 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 COG6Q9Y2V7 657 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 CHMP3Q9Y3E7 222 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 RPTORQ8N122 1335 aa6.75□□□□□ -1.33
RAB28P1-201ENST00000411517 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 ADARB2-AS1A8MUL3 147 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 FKTNO75072 461 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 TBC1D8O95759 1140 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 ADH7P40394 386 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 EIF6P56537 245 aaKnown RBP6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 CDC37L1Q7L3B6 337 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 DPF3Q92784 378 aa6.74□□□□□ -1.33
RAB28P1-201ENST00000411517 ZNF277Q9NRM2 450 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms