RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 PRR29P0C7W0 189 aa16.1■□□□□ 0.17
VPS26B-201ENST00000281187 ERCC3P19447 782 aa16.1■□□□□ 0.17
VPS26B-201ENST00000281187 ODF2Q5BJF6 829 aa16.1■□□□□ 0.17
VPS26B-201ENST00000281187 BCAS4Q8TDM0 211 aa16.1■□□□□ 0.17
VPS26B-201ENST00000281187 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
VPS26B-201ENST00000281187 ALDH8A1Q9H2A2 487 aaPredicted RBP16.1■□□□□ 0.17
VPS26B-201ENST00000281187 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
VPS26B-201ENST00000281187 ABCF2Q9UG63 623 aa16.1■□□□□ 0.17
VPS26B-201ENST00000281187 LOC102724159A0A0B4J2E5 919 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 MCM3P25205 808 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 PWP2Q15269 919 aaKnown RBP16.09■□□□□ 0.17
VPS26B-201ENST00000281187 SPA17Q15506 151 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 ZNF174Q15697 407 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS26B-201ENST00000281187 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
VPS26B-201ENST00000281187 FAM71BQ8TC56 605 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 ATRIPQ8WXE1 791 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 EYA2O00167 538 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS26B-201ENST00000281187 KCNA6P17658 529 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 ADORA1P30542 326 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 FMR1Q06787 632 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS26B-201ENST00000281187 NR5A1Q13285 461 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 PNKPQ96T60 521 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 BCCIPQ9P287 314 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS26B-201ENST00000281187 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 SRGAP2O75044 1071 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 CDC25AP30304 524 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 TC2NQ8N9U0 490 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
VPS26B-201ENST00000281187 GOLGA6BA6NDN3 693 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 ZFYP08048 801 aaPredicted RBP16.08■□□□□ 0.17
VPS26B-201ENST00000281187 CTDSPL2Q05D32 466 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 WTAPQ15007 396 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 OTUD6BQ8N6M0 293 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 TRIM47Q96LD4 638 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 NACAP1Q9BZK3 213 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 POLD4Q9HCU8 107 aa16.08■□□□□ 0.17
VPS26B-201ENST00000281187 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.17
VPS26B-201ENST00000281187 IDEP14735 1019 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 INPP5BP32019 993 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 MAGEA9P43362 315 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 IQCEQ6IPM2 695 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
VPS26B-201ENST00000281187 WWC3Q9ULE0 1092 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
VPS26B-201ENST00000281187 NPHP4O75161 1426 aaPredicted RBP16.08■□□□□ 0.16
VPS26B-201ENST00000281187 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
VPS26B-201ENST00000281187 ATP1A2P50993 1020 aa16.08■□□□□ 0.16
VPS26B-201ENST00000281187 EXOSC10Q01780 885 aaKnown RBP16.08■□□□□ 0.16
VPS26B-201ENST00000281187 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.16
VPS26B-201ENST00000281187 SLC4A8Q2Y0W8 1093 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 NOSTRINQ8IVI9 506 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 APPBP2Q92624 585 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 ERBB3P21860 1342 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 A0A0U1RQJ8 604 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 GCP02774 474 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 CDC27P30260 824 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 CEP57Q86XR8 500 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 HDAC6Q9UBN7 1215 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 PIK3C2BO00750 1634 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 TMTC1Q8IUR5 882 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 CCDC47Q96A33 483 aaKnown RBP16.07■□□□□ 0.16
VPS26B-201ENST00000281187 FAM89AQ96GI7 184 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
VPS26B-201ENST00000281187 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
VPS26B-201ENST00000281187 KCNJ6P48051 423 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 RNASE9P60153 205 aaKnown RBP16.06■□□□□ 0.16
VPS26B-201ENST00000281187 RAD9BQ6WBX8 426 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 IFT81Q8WYA0 676 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 NEURL4Q96JN8 1562 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 TULP2O00295 520 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 KRT86O43790 486 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 GNGT1P63211 74 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 KCTD16Q68DU8 428 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 MAATS1Q7Z4T9 603 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 NOA1Q8NC60 698 aaKnown RBP16.06■□□□□ 0.16
VPS26B-201ENST00000281187 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
VPS26B-201ENST00000281187 DENND2AQ9ULE3 1009 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 SAR1BQ9Y6B6 198 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 TNRQ92752 1358 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 HLTFQ14527 1009 aaKnown RBP eCLIP16.06■□□□□ 0.16
VPS26B-201ENST00000281187 RILPL1Q5EBL4 403 aa16.06■□□□□ 0.16
VPS26B-201ENST00000281187 HECW2Q9P2P5 1572 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
VPS26B-201ENST00000281187 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms