RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Nav2E9Q842 2432 aa12.88□□□□□ -0.35
Rpf1-203ENSMUST00000199079 TroQ6DIC6 2087 aa12.88□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Hbb-bsA8DUK4 147 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Hbb-b1P02088 147 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Slc16a4Q8R0M8 500 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ormdl2Q9CQZ0 153 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ighv3-3A0A0A6YWL2 116 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Emp2O88662 172 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Usmg5Q78IK2 58 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Snx22Q8C084 192 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ovol2Q8CIV7 274 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Dusp14Q9JLY7 198 aa12.87□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Igsf23B2RTN2 239 aa12.86□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ang5Q5GAN1 145 aa12.86□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ighv1-22A0A075B5U7 117 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Lgals6O54891 301 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 TshbP12656 138 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Odf3Q920N1 254 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Krtap26-1Q9D7N2 215 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Csmd1Q923L3 3564 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Myo9aQ8C170 2542 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Gm37988J3QM41 62 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 P01739 132 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Defa9P50707 93 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 SstP60041 116 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Sdhaf1Q3U276 118 aa12.85□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Sprr3O09116 238 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 S100a4P07091 101 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Tex26Q0VB26 296 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Tmem88bQ3TYP4 173 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Khdc1cQ4KL78 166 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Klk10Q99M20 278 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 SelenokQ9JLJ1 94 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ubr5Q80TP3 2792 aa12.84□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Igkv4-69A0A0B4J1I6 116 aa12.83□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Bri3P28662 125 aa12.83□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Sumo2P61957 95 aaKnown RBP12.83□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Tal2Q62282 108 aa12.83□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Mrpl36Q99N90 102 aa12.83□□□□□ -0.35
Rpf1-203ENSMUST00000199079 Ndufa1O35683 70 aa12.83□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Fgf6P21658 208 aa12.83□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gpr82Q8BZR0 328 aa12.83□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Pxt1Q8K459 51 aa12.83□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Erg28Q9ERY9 140 aa12.83□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Cspg4Q8VHY0 2327 aa12.82□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Trav6-4A0A075B6B4 115 aa12.82□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gm17430F6RSK3 157 aa12.82□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Bak1O08734 209 aa12.82□□□□□ -0.36
Rpf1-203ENSMUST00000199079 S100a8P27005 89 aa12.82□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gkn1Q9CR36 201 aa12.82□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Htr1dQ61224 374 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Klk7Q91VE3 249 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Prss29Q99MS4 279 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gm17455G3UW87 128 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 P01750 117 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 NrgnP60761 78 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Olfr312Q7TRZ9 308 aa12.81□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Zfyve26Q5DU37 2529 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Ighv1-64A0A075B5X3 117 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gm10226O88253 85 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Rpl32P62911 135 aaKnown RBP12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Smr3aQ61900 147 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Rpl36-ps4A0A140T8U4 117 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gm26727M0QWT1 121 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Cox7cP17665 63 aa12.8□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Prrc2aQ7TSC1 2158 aaKnown RBP12.79□□□□□ -0.36
Rpf1-203ENSMUST00000199079 P01794 123 aa12.79□□□□□ -0.36
Rpf1-203ENSMUST00000199079 TcraP01849 138 aa12.79□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gm9925F6T2U3 160 aa12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 1700067P10RikG3X8U2 183 aa12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Rpl11Q9CXW4 178 aaKnown RBP12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Ighv1-66A0A075B5X5 117 aa12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Gm26602M0QWA4 95 aa12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Spcs1Q9D958 161 aa12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Iah1Q9DB29 249 aa12.78□□□□□ -0.36
Rpf1-203ENSMUST00000199079 Ighv1-50A0A075B5W1 117 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gm12845A0A0N4SUM5 588 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Thy1P01831 162 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Mtatp8P03930 67 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Edn2P22389 175 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gm7489Q3UT34 171 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Tm4sf20Q9CQY8 226 aa12.77□□□□□ -0.37
Rpf1-203ENSMUST00000199079 P01643 108 aa12.76□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Wfdc21Q8BTE6 63 aa12.76□□□□□ -0.37
Rpf1-203ENSMUST00000199079 BlcapP62951 87 aa12.76□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Q9CX63 252 aa12.76□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Tep1P97499 2629 aa12.75□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Trav2Q5R1I9 109 aa12.75□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gm16223Q8CBM3 117 aa12.75□□□□□ -0.37
Rpf1-203ENSMUST00000199079 P01727 129 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Smim1P0C8K7 78 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gtf2h5Q8K2X8 71 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Smg1Q8BKX6 3658 aaKnown RBP12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Ighv14-1A0A075B5R4 117 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 A730046J19RikA0A1B0GSN8 89 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Esp4A8R0T8 117 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gm10521E9PZK0 135 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gm10271F6WY25 52 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Vamp8O70404 101 aa12.74□□□□□ -0.37
Rpf1-203ENSMUST00000199079 Gm5629P06327 117 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms