RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Cox11Q6P8I6 275 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Arl3Q9WUL7 182 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ighv1-80A0A075B5Y3 117 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Igkv20-101-2A0A0G2JDU3 113 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ighv1-82A0A0G2JEU7 117 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 4930447F04RikA2AFR2 126 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Sh3bgrl2Q8BG73 107 aa9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Prrc2aQ7TSC1 2158 aaKnown RBP9.82□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ptprz1B9EKR1 2312 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ighv1-22A0A075B5U7 117 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 S100a4P07091 101 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Fxyd7P59648 80 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Q4KKZ1 196 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ang5Q5GAN1 145 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ormdl2Q9CQZ0 153 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gkn1Q9CR36 201 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Dopey2Q3UHQ6 2295 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 TgfaP48030 159 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Sumo2P61957 95 aaKnown RBP9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Mrpl36Q99N90 102 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 SNORCQ9CXL7 121 aa9.81□□□□□ -0.84
Nup88-203ENSMUST00000108531 Igkv4-57-1A0A075B5M4 119 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm15557A6PWY0 234 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Casp6O08738 276 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Pla2g2cP48076 150 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm6040Q4QY32 63 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Prr9Q8BV84 116 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gata3P23772 443 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Tcf15Q60756 195 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Try10Q792Z1 246 aaKnown RBP9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 Rasl11bQ922H7 247 aa9.8□□□□□ -0.84
Nup88-203ENSMUST00000108531 P01724 129 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 P01727 129 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Smim1P0C8K7 78 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Tex26Q0VB26 296 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Olfr312Q7TRZ9 308 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Tctex1d4Q8CDY7 219 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 8030423J24RikQ9CX45 142 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Atxn7l1Q9CZ05 146 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm16223Q8CBM3 117 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ovol2Q8CIV7 274 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 LbhQ9CX60 105 aa9.79□□□□□ -0.84
Nup88-203ENSMUST00000108531 Esp4A8R0T8 117 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 P01820 115 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 CenpeQ6RT24 2474 aaKnown RBP9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ighv12-3A0A075B5T1 117 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 Ighv1-75A0A075B5Y2 117 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 Tcte2E9PY37 120 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 P18527 97 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 Hist1h1tQ07133 208 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm26920S4R2A5 56 aa9.78□□□□□ -0.84
Nup88-203ENSMUST00000108531 Lama5Q61001 3718 aa9.77□□□□□ -0.84
Nup88-203ENSMUST00000108531 Gm12845A0A0N4SUM5 588 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Brd3osA0A1B0GRB6 84 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Vamp8O70404 101 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Ins2P01326 110 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Sdhaf1Q3U276 118 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Rpl24Q8BP67 157 aaKnown RBP9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Zfhx3Q61329 3726 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01739 132 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Cela2aP05208 271 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Cks1brtQ3UNC9 96 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gm14137Q8CE97 175 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Prss29Q99MS4 279 aa9.77□□□□□ -0.85
Nup88-203ENSMUST00000108531 Iglc1A0A0G2JE99 106 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Lgals6O54891 301 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01843 105 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gpr82Q8BZR0 328 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Slc16a4Q8R0M8 500 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Mustn1Q99JI1 82 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Ighv3-3A0A0A6YWL2 116 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gm17430F6RSK3 157 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Q9CX63 252 aa9.76□□□□□ -0.85
Nup88-203ENSMUST00000108531 Rpl11Q9CXW4 178 aaKnown RBP9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Q9D727 114 aa9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Rbmxl2Q9DAE2 385 aaKnown RBP9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Slamf6Q9ET39 351 aa9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gm10271F6WY25 52 aa9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Mrps12O35680 139 aa9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01837 106 aa9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Smr3aQ61900 147 aa9.75□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gm5629P06327 117 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 AamdcQ8R0P4 122 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Adgrg4B7ZCC9 3073 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Fam240aJ3QNP9 97 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01750 117 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Samd10Q7TST3 202 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Prss41Q920S2 322 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Spink12Q9D256 87 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Pradc1Q9D9N8 188 aa9.74□□□□□ -0.85
Nup88-203ENSMUST00000108531 Csn3P06796 181 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 Tmem170bP86050 132 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 Olfr313Q5NC55 308 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 Rpl36-ps4A0A140T8U4 117 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 A730046J19RikA0A1B0GSN8 89 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 Tcrg-C3L7N479 172 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01741 114 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 P03985 172 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 MdfiP70331 251 aa9.73□□□□□ -0.85
Nup88-203ENSMUST00000108531 Hrct1Q9D6B9 109 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms