RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Tmem254aP0DN89 123 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Tmem254bP0DN90 123 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Tmem254cP0DN91 123 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Dad1P61804 113 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 A230072I06RikQ3UUJ8 172 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ang3P97802 145 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Pygo1Q9D0P5 417 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Fgf6P21658 208 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ndufa11Q9D8B4 141 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Igkv5-37A0A140T8N4 115 aa12.97□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Spata25Q9DA57 226 aa12.97□□□□□ -0.33
Col17a1-202ENSMUST00000086923 MyofQ69ZN7 2048 aaKnown RBP12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Taf15Q8BQ46 557 aaKnown RBP12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Naa38Q9D2U5 125 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Arfgef3Q3UGY8 2170 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Trav6-4A0A075B6B4 115 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Mrps12O35680 139 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 AmelxP63277 210 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Zgrf1Q0VGT4 1863 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Gm44965A0A0N4SVR3 59 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Gm20481G3UXK4 153 aa12.96□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Cdkn1aP39689 159 aa12.95□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ighv2-6A0A075B6A7 116 aa12.95□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Igkv4-69A0A0B4J1I6 116 aa12.95□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Trav4-3A0A0B4J1K1 110 aa12.95□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Igkv8-24A0A140T8P5 121 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Armcx4E9PWM3 2356 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 P01655 112 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ang4Q3TMQ6 144 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Defb12Q8K4N3 78 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ifitm1Q9D103 106 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Tsc2Q61037 1814 aa12.94□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Atg2bQ80XK6 2075 aa12.93□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Asxl3Q8C4A5 2259 aa12.93□□□□□ -0.34
Col17a1-202ENSMUST00000086923 P01680 129 aa12.93□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Reg3dQ9QUS9 175 aa12.93□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ighv8-12A0A0G2JDE1 119 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Cr2P19070 1025 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Sox16Q62247 57 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ccl19O70460 108 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ucn2Q99ML8 113 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 RlfA2A7F4 1918 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Psmb8P28063 276 aa12.92□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Gm8251F6VUT6 1994 aa12.91□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Dpm3Q9D1Q4 92 aa12.91□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ly75Q60767 1723 aa12.91□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Igkv4-78A0A0A6YYE5 119 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Igkv1-99F6XWB2 120 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Ube2e1P52482 193 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Gm5468Q8C3D3 155 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 4933414I15RikQ9D4D5 133 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Spink4O35679 86 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Mrpl35Q9CQL6 188 aa12.9□□□□□ -0.34
Col17a1-202ENSMUST00000086923 Cep250Q60952 2414 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Acyp1P56376 99 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Triap1Q9D8Z2 76 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ighv1-20A0A0A6YX66 117 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ang2Q64438 145 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ighv1-55A0A075B5W6 117 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Gm20878L7N244 103 aa12.89□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Igkv8-16A0A0G2JDG9 121 aa12.88□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Dph3Q8K0W9 82 aa12.88□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Plxna1P70206 1894 aa12.88□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ighv1-81A0A075B5Y4 117 aa12.88□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Gm2564F6Z9S8 108 aa12.88□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Obox8V9GWY9 217 aa12.87□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Heatr5aQ5PRF0 2038 aa12.87□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Cd59bP58019 129 aa12.87□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Cxcl14Q9WUQ5 99 aa12.87□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Fstl3Q9EQC7 256 aa12.87□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Prok1Q14A28 105 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 BC048502Q80Y74 154 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Trip12G5E870 2025 aaKnown RBP12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 P01728 117 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Rpl39P62892 51 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Shank3Q4ACU6 1730 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Igkv4-79A0A075B5L8 119 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Gm20499D3Z4G5 72 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Serp2Q6TAW2 65 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Timm17aQ9Z0V8 171 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Dscaml1Q4VA61 2053 aa12.86□□□□□ -0.35
Col17a1-202ENSMUST00000086923 BC048562Q80ZQ7 204 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Jmjd1cQ69ZK6 2350 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Igkv4-74A0A0B4J1I3 119 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Trbv13-1A0A0B4J1P8 112 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ormdl1Q921I0 153 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ly6c1P0CW02 131 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Arid2E9Q7E2 1828 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Sbf2E9PXF8 1872 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Polr2aP08775 1970 aaKnown RBP12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Odf3l1Q810P2 275 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Bub3Q9WVA3 326 aa12.85□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Defb30Q30KN4 75 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Usmg5Q78IK2 58 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Gm9747Q810H1 104 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ighv1-58A0A075B5W9 117 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Trav14-1A0A0G2JF94 121 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Smrp1Q2MH31 260 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Atp6v0e1Q9CQD8 81 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Ralgapa2A3KGS3 1872 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms