RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Col4a6B1AVK5 1691 aa5.13□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Ighv3-1A0A075B5S6 116 aa5.13□□□□□ -1.59
Scn1a-201ENSMUST00000077489 9430069I07RikQ9CX21 111 aa5.13□□□□□ -1.59
Scn1a-201ENSMUST00000077489 LitafQ9JLJ0 161 aa5.13□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Trbv14A0A140T8L9 115 aa5.13□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Klhdc3Q8VEM9 382 aa5.13□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Igkv4-78A0A0A6YYE5 119 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Sslp1Q3UN54 99 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 BC048562Q80ZQ7 204 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Q99M08 65 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Timm17aQ9Z0V8 171 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm12353A2AGJ4 60 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Defb26Q30KN7 186 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Lyg1Q9D7Q0 197 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Sptbn2Q68FG2 2388 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 GrnP28798 589 aaKnown RBP5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Znf740Q6NZQ6 180 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Znrd1Q791N7 123 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Chchd5Q9CQP3 110 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 ThadaA8C756 1938 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 CtsgP28293 261 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gatd1Q8BFQ8 220 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Cacna1bO55017 2327 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Heatr5bQ8C547 2070 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Eif4ebp1Q60876 117 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Igkv4-72A0A0B4J1I4 117 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Atp5eP56382 52 aa5.12□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gp9O88186 177 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 P01750 117 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Acyp1P56376 99 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Msrb3Q8BU85 253 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Abca7Q91V24 2159 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm9961Q8BNV2 113 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Ociad2Q9D8W7 154 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Prok2Q9QXU7 128 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Trbv16A0A0B4J1H3 115 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Fam24aQ8CF27 98 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 4933414I15RikQ9D4D5 133 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Zc2hc1bQ9D534 172 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Spta1P08032 2415 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Nup210lQ9D2F7 1881 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 P01793 123 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 E130218I03RikA0A0U1RNU5 63 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm15093A2BI72 449 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm15085Q62012 449 aa5.11□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Igkv4-69A0A0B4J1I6 116 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Nxph4G3X9N5 304 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Spry4Q9WTP2 300 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 TncQ80YX1 2110 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Trav12d-3A0A075B6A4 115 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Trav9d-4A0A0G2JG37 103 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Mrps12O35680 139 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Kif26bQ7TNC6 2112 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Igkv4-79A0A075B5L8 119 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Zfp951A0A087WRH0 451 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Notch3Q61982 2318 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Dennd4aE9Q8V6 1869 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Vsig4F6TUL9 280 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Fhl3Q9R059 289 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Akap6E9Q9K8 2307 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Myo7bQ99MZ6 2113 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Col24a1Q30D77 1733 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Tmem213Q08EA8 116 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Rmi2Q3UPE3 149 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 4930415O20RikQ8CDT5 131 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Spata25Q9DA57 226 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Dock3Q8CIQ7 2027 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Igkv4-81A0A0G2JEY5 119 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Prok1Q14A28 105 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Nbl1Q61477 178 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 9930022D16RikQ8BG27 128 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 B230307C23RikQ8BLB2 64 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Pfn2Q9JJV2 140 aa5.1□□□□□ -1.59
Scn1a-201ENSMUST00000077489 SelenowP63300 88 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Ndufb4Q9CQC7 129 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Ahctf1Q8CJF7 2243 aaKnown RBP5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Nlrc5C3VPR6 1915 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Hoxb4P10284 250 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Atp5g3P56384 141 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 A230072I06RikQ3UUJ8 172 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Atp5g1Q9CR84 136 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 MplkipQ9D011 178 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Hrct1Q9D6B9 109 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Ighv8-8A0A0A6YXQ0 119 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Nsun4C4P6S0 806 aaKnown RBP5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm10638F6QEG2 257 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Wfdc2Q9DAU7 174 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Obox8V9GWY9 217 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Dock4P59764 1978 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm15091B1AZM2 449 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Gm17455G3UW87 128 aa5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Prr3Q811B5 190 aaKnown RBP5.09□□□□□ -1.59
Scn1a-201ENSMUST00000077489 Igll1P20764 209 aa5.09□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Rbmy1bQ60990 380 aa5.09□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Ang4Q3TMQ6 144 aa5.09□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Atg2aQ6P4T0 1914 aa5.08□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Ighv8-4A0A0A6YW26 117 aa5.08□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Ndufa12Q7TMF3 145 aaKnown RBP5.08□□□□□ -1.6
Scn1a-201ENSMUST00000077489 Ank3G5E8K5 1961 aa5.08□□□□□ -1.6
Scn1a-201ENSMUST00000077489 7420426K07RikQ3UX66 186 aa5.08□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms