RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Pkd1l3Q2EG98 2201 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Sigmar1O55242 223 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Olfr313Q5NC55 308 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Bcorl1A2AQH4 1781 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 GfyJ3KML8 504 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Defb47Q30KN1 79 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Gm9913Q8BQQ2 135 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Itgb4A2A863 1818 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Med12A2AGH6 2190 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Igkv3-5A0A140T8M6 119 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Lage3Q9CR70 148 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 MpdzQ8VBX6 2055 aa11.32□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Trbv13-1A0A0B4J1P8 112 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Foxf1Q61080 378 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Ncor2Q9WU42 2472 aaKnown RBP11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Ros1Q78DX7 2340 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Igkv1-88A0A140T8N1 120 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Gm3618D3Z4P5 127 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Klf11Q8K1S5 502 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Ndufc2Q9CQ54 120 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Ss18l2Q9D174 77 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 LenepQ9WVB6 61 aa11.31□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Arid2E9Q7E2 1828 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Ighv1-50A0A075B5W1 117 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Med13Q5SWW4 2171 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Fhl1P97447 280 aaKnown RBP11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 PrcdQ00LT2 53 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Qrich2A0A140LIY9 2337 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Cfap126Q6P8X9 189 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Trav14-3A0A075B607 120 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Gm17472A0A075B683 117 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Tcl1b2P56841 117 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 COA4Q8BT51 87 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Rbmy1bQ60990 380 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Hoxb4P10284 250 aa11.3□□□□□ -0.6
Col4a1-201ENSMUST00000033898 4933414I15RikQ9D4D5 133 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Igkv8-18A0A0B4J1J3 123 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 9430097D07RikQ8BS47 195 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Trbv14A0A140T8L9 115 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 March3Q8BRX9 218 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Gm17324Q8C6J8 137 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Tmem243B2RVB9 118 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 A930003A15RikQ3U552 87 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 SprnQ8BWU1 147 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Gm4861Q8C5A4 106 aa11.29□□□□□ -0.6
Col4a1-201ENSMUST00000033898 BB014433Q8C5R5 389 aa11.28□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Igkv3-10A0A0G2JGN0 119 aa11.28□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Lmo1Q924W9 156 aa11.28□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Trav13d-4A0A0G2JFX3 110 aa11.27□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Tnfrsf26P83626 204 aa11.27□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Spink4O35679 86 aa11.27□□□□□ -0.6
Col4a1-201ENSMUST00000033898 Bdp1Q571C7 2467 aa11.27□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Mrpl52Q9D0Y8 121 aa11.27□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Ebi3O35228 228 aa11.27□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Rpl18aP62717 176 aaKnown RBP11.27□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Znrf2Q71FD5 238 aa11.27□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Fam216bQ8CC14 138 aa11.27□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Tmem14cQ9CQN6 114 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Igkv6-15A0A140T8M5 115 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Gm20499D3Z4G5 72 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Spink8Q09TK9 105 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Pla2g2aP31482 146 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Gm11733Q8BQP1 125 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Cep295Q8BQ48 2412 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Zcwpw2Q08EN7 125 aa11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Ahctf1Q8CJF7 2243 aaKnown RBP11.26□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Nbl1Q61477 178 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Gm20379A0A087WR34 119 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Plscr4P58196 326 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Tomm6Q9CQN3 74 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Fxyd1Q9Z239 92 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Igkv12-89A0A0G2JGW8 112 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Acyp1P56376 99 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Atp6v0e2Q91XE7 81 aa11.25□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Ang3P97802 145 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Gtsf1Q9DAN6 167 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 TprF6ZDS4 2431 aaKnown RBP11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 LctF8VPT3 1931 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Slc25a29Q8BL03 306 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Dmrtc1c1Q9D410 238 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Trav13-2A0A075B649 110 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Lyrm9Q3UN90 78 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Ube2aQ9Z255 152 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Gm10518F6UQQ9 182 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 4930442H23RikQ9D5G7 103 aa11.24□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Tln2Q71LX4 2375 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 NrgnP60761 78 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Ang4Q3TMQ6 144 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Tm2d2Q8R0I4 213 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Dazap2Q9DCP9 168 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 CrygdP04342 174 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Tnfrsf23Q9ER63 176 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Trav6-6A0A075B603 114 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Trav13n-1A0A0G2JEU8 110 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Loxl1P97873 607 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 UrahQ9CRB3 118 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 BlcapP62951 87 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 Clec4b2Q67DU8 208 aa11.23□□□□□ -0.61
Col4a1-201ENSMUST00000033898 P01643 108 aa11.22□□□□□ -0.61
Col4a1-201ENSMUST00000033898 SvipQ3UZP4 77 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms