RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 P01757 117 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Prima1Q810F0 153 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Spock3Q8BKV0 436 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Atp6v0e1Q9CQD8 81 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ighv1-22A0A075B5U7 117 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Fgf6P21658 208 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gm5150Q1AN92 299 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 TdhQ8K3F7 373 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Clec5aQ9R007 190 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Rab9aQ9R0M6 201 aa12.53□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ighv3-8A0A075B5T0 131 aa12.52□□□□□ -0.4
Trim28-201ENSMUST00000005705 Ndufc2Q9CQ54 120 aa12.52□□□□□ -0.4
Trim28-201ENSMUST00000005705 Atxn7l1Q9CZ05 146 aa12.52□□□□□ -0.4
Trim28-201ENSMUST00000005705 Gm28044L7N1X0 119 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Defa3P28310 93 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Defa10P50708 93 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Defa15P50713 93 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Ripply2Q2WG76 128 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Trav7-2Q5R1I3 112 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 MycbQ6P8Z1 170 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Trbv13-1A0A0B4J1P8 112 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gm10521E9PZK0 135 aa12.52□□□□□ -0.41
Trim28-201ENSMUST00000005705 Trav14-2A0A075B694 121 aa12.51□□□□□ -0.41
Trim28-201ENSMUST00000005705 Esp23A8R0V5 104 aa12.51□□□□□ -0.41
Trim28-201ENSMUST00000005705 Znf239P24399 201 aa12.51□□□□□ -0.41
Trim28-201ENSMUST00000005705 Hcfc1Q61191 2045 aaKnown RBP12.51□□□□□ -0.41
Trim28-201ENSMUST00000005705 Uqcrfs1Q9CR68 274 aa12.5□□□□□ -0.41
Trim28-201ENSMUST00000005705 ManfQ9CXI5 179 aaKnown RBP12.5□□□□□ -0.41
Trim28-201ENSMUST00000005705 Defb30Q30KN4 75 aa12.5□□□□□ -0.41
Trim28-201ENSMUST00000005705 A730015C16RikQ8C992 119 aa12.5□□□□□ -0.41
Trim28-201ENSMUST00000005705 Rnf185Q91YT2 192 aa12.5□□□□□ -0.41
Trim28-201ENSMUST00000005705 E030018B13RikJ3QMS9 113 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 PolP10400 120 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Ighv2-6A0A075B6A7 116 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Ighv1-20A0A0A6YX66 117 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Vsig4F6TUL9 280 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Edn2P22389 175 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Tcl1b4P56844 120 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gata4Q08369 441 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gpx7Q99LJ6 186 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gm6525A0A0A6YW33 106 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Trav3-1Q5R1I8 114 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Nbl1Q61477 178 aa12.49□□□□□ -0.41
Trim28-201ENSMUST00000005705 Itpr3P70227 2670 aa12.48□□□□□ -0.41
Trim28-201ENSMUST00000005705 P01801 115 aa12.48□□□□□ -0.41
Trim28-201ENSMUST00000005705 E130116L18RikQ8BMV6 101 aa12.48□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gm10118Q8C8J5 116 aa12.48□□□□□ -0.41
Trim28-201ENSMUST00000005705 Fmc1Q9CR13 113 aa12.48□□□□□ -0.41
Trim28-201ENSMUST00000005705 OtorQ9JIE3 128 aa12.48□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gm21370Q3T9V6 190 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 Vwc2lQ505H4 222 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 Bhlha15Q9QYC3 197 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 ApomQ9Z1R3 190 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 P01741 114 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 Cela2aP05208 271 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 LystP97412 3788 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 PspnO70300 156 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 Ighv1-62-3P01754 117 aa12.47□□□□□ -0.41
Trim28-201ENSMUST00000005705 Spag11Q8K4N2 71 aa12.46□□□□□ -0.41
Trim28-201ENSMUST00000005705 Odf3Q920N1 254 aa12.46□□□□□ -0.41
Trim28-201ENSMUST00000005705 Gkn1Q9CR36 201 aa12.46□□□□□ -0.41
Trim28-201ENSMUST00000005705 Lelp1Q9DAE3 120 aa12.46□□□□□ -0.41
Trim28-201ENSMUST00000005705 Tmem262D3Z338 116 aa12.46□□□□□ -0.42
Trim28-201ENSMUST00000005705 Klk7Q91VE3 249 aa12.46□□□□□ -0.42
Trim28-201ENSMUST00000005705 Fbxl15Q91W61 300 aa12.46□□□□□ -0.42
Trim28-201ENSMUST00000005705 Chd6A3KFM7 2711 aa12.45□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gp9O88186 177 aa12.45□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gtsf1lQ9CWD0 151 aa12.45□□□□□ -0.42
Trim28-201ENSMUST00000005705 Ang5Q5GAN1 145 aa12.45□□□□□ -0.42
Trim28-201ENSMUST00000005705 Crip3Q6Q6R3 243 aa12.45□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gm33815A0A087WNV3 176 aa12.44□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gm29644A0A087WPG2 191 aa12.44□□□□□ -0.42
Trim28-201ENSMUST00000005705 Brd3osA0A1B0GRB6 84 aa12.44□□□□□ -0.42
Trim28-201ENSMUST00000005705 Tmem210Q9D2F0 147 aa12.44□□□□□ -0.42
Trim28-201ENSMUST00000005705 Pde6hP61249 83 aa12.44□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gm16223Q8CBM3 117 aa12.44□□□□□ -0.42
Trim28-201ENSMUST00000005705 PlnP61014 52 aa12.43□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gm9970F6ZED4 185 aa12.43□□□□□ -0.42
Trim28-201ENSMUST00000005705 MsmbO08540 113 aa12.43□□□□□ -0.42
Trim28-201ENSMUST00000005705 Q4KKZ1 196 aa12.43□□□□□ -0.42
Trim28-201ENSMUST00000005705 Arl3Q9WUL7 182 aa12.43□□□□□ -0.42
Trim28-201ENSMUST00000005705 Iglc1A0A0G2JE99 106 aa12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 S100a4P07091 101 aa12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 Edn3P48299 214 aa12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 Znf575Q3TXZ1 239 aa12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 Lypd1Q8BLC3 141 aa12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 BlcapP62951 87 aa12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 Rbmxl2Q9DAE2 385 aaKnown RBP12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 Zfp462B1AWL2 2495 aaKnown RBP12.42□□□□□ -0.42
Trim28-201ENSMUST00000005705 Trav19A0A0B4J1K4 119 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gm45785A0A1B0GT05 94 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 Gm28038F7BCN9 126 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 Cox8cA6H666 72 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 P18527 97 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 Q9CX63 252 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 Unc79Q0KK59 2596 aa12.41□□□□□ -0.42
Trim28-201ENSMUST00000005705 Olfr1209Q3SXJ3 310 aa12.4□□□□□ -0.42
Trim28-201ENSMUST00000005705 Spink13Q3UTS8 97 aa12.4□□□□□ -0.42
Trim28-201ENSMUST00000005705 Msrb2Q78J03 175 aa12.4□□□□□ -0.42
Trim28-201ENSMUST00000005705 Foxi1Q922I5 372 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 143.9 ms