RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 USP34Q70CQ2 3546 aa0.51□□□□□ -2.33
PSPC1-208ENST00000635562 VPS13CQ709C8 3753 aa0.51□□□□□ -2.33
PSPC1-208ENST00000635562 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
PSPC1-208ENST00000635562 VPS13AQ96RL7 3174 aa0.51□□□□□ -2.33
PSPC1-208ENST00000635562 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
PSPC1-208ENST00000635562 SPRR2EP22531 72 aa0.5□□□□□ -2.33
PSPC1-208ENST00000635562 SRCAPQ6ZRS2 3230 aa0.5□□□□□ -2.33
PSPC1-208ENST00000635562 ASPMQ8IZT6 3477 aa0.49□□□□□ -2.33
PSPC1-208ENST00000635562 MUC17Q685J3 4493 aa0.49□□□□□ -2.33
PSPC1-208ENST00000635562 HERC1Q15751 4861 aa0.49□□□□□ -2.33
PSPC1-208ENST00000635562 MYO15AQ9UKN7 3530 aa0.48□□□□□ -2.33
PSPC1-208ENST00000635562 SPEGQ15772 3267 aa0.47□□□□□ -2.33
PSPC1-208ENST00000635562 CD52P31358 61 aa0.46□□□□□ -2.34
PSPC1-208ENST00000635562 EYSQ5T1H1 3165 aa0.45□□□□□ -2.34
PSPC1-208ENST00000635562 STARD9Q9P2P6 4700 aa0.44□□□□□ -2.34
PSPC1-208ENST00000635562 MYO9AB2RTY4 2548 aa0.43□□□□□ -2.34
PSPC1-208ENST00000635562 EP400Q96L91 3159 aa0.43□□□□□ -2.34
PSPC1-208ENST00000635562 UNC80Q8N2C7 3258 aa0.43□□□□□ -2.34
PSPC1-208ENST00000635562 MT1EP04732 61 aa0.42□□□□□ -2.34
PSPC1-208ENST00000635562 PCNTO95613 3336 aa0.42□□□□□ -2.34
PSPC1-208ENST00000635562 GOLGB1Q14789 3259 aaKnown RBP0.41□□□□□ -2.34
PSPC1-208ENST00000635562 HMCN2Q8NDA2 5059 aa0.41□□□□□ -2.34
PSPC1-208ENST00000635562 FAT4Q6V0I7 4981 aa0.41□□□□□ -2.34
PSPC1-208ENST00000635562 BRCA2P51587 3418 aa0.4□□□□□ -2.35
PSPC1-208ENST00000635562 HTN3P15516 51 aa0.4□□□□□ -2.35
PSPC1-208ENST00000635562 WDFY3Q8IZQ1 3526 aa0.4□□□□□ -2.35
PSPC1-208ENST00000635562 VCANP13611 3396 aa0.39□□□□□ -2.35
PSPC1-208ENST00000635562 MT1HP80294 61 aa0.39□□□□□ -2.35
PSPC1-208ENST00000635562 LRP2P98164 4655 aa0.39□□□□□ -2.35
PSPC1-208ENST00000635562 MT1LQ93083 61 aa0.38□□□□□ -2.35
PSPC1-208ENST00000635562 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
PSPC1-208ENST00000635562 DEFB4AO15263 64 aa0.37□□□□□ -2.35
PSPC1-208ENST00000635562 DNAH14Q0VDD8 3507 aa0.36□□□□□ -2.35
PSPC1-208ENST00000635562 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
PSPC1-208ENST00000635562 SPRR2GQ9BYE4 73 aa0.35□□□□□ -2.35
PSPC1-208ENST00000635562 CENPFP49454 3210 aa0.34□□□□□ -2.35
PSPC1-208ENST00000635562 GPR98Q8WXG9 6306 aa0.33□□□□□ -2.36
PSPC1-208ENST00000635562 DNHD1Q96M86 4753 aa0.33□□□□□ -2.36
PSPC1-208ENST00000635562 KMT2CQ8NEZ4 4911 aaKnown RBP0.32□□□□□ -2.36
PSPC1-208ENST00000635562 MT1XP80297 61 aa0.31□□□□□ -2.36
PSPC1-208ENST00000635562 PCLOQ9Y6V0 5065 aa0.3□□□□□ -2.36
PSPC1-208ENST00000635562 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
PSPC1-208ENST00000635562 KMT2DO14686 5537 aa0.29□□□□□ -2.36
PSPC1-208ENST00000635562 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
PSPC1-208ENST00000635562 KRTAP19-8Q3LI54 63 aa0.26□□□□□ -2.37
PSPC1-208ENST00000635562 USH2AO75445 5202 aa0.25□□□□□ -2.37
PSPC1-208ENST00000635562 KRTAP19-7Q3SYF9 63 aa0.25□□□□□ -2.37
PSPC1-208ENST00000635562 MUC2Q02817 5179 aa0.23□□□□□ -2.37
PSPC1-208ENST00000635562 CDH23Q9H251 3354 aa0.23□□□□□ -2.37
PSPC1-208ENST00000635562 MT1GP13640 62 aa0.23□□□□□ -2.37
PSPC1-208ENST00000635562 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
PSPC1-208ENST00000635562 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
PSPC1-208ENST00000635562 UBR4Q5T4S7 5183 aa0.22□□□□□ -2.37
PSPC1-208ENST00000635562 RYR3Q15413 4870 aa0.21□□□□□ -2.38
PSPC1-208ENST00000635562 HERC2O95714 4834 aa0.21□□□□□ -2.38
PSPC1-208ENST00000635562 RYR1P21817 5038 aa0.21□□□□□ -2.38
PSPC1-208ENST00000635562 BIRC6Q9NR09 4857 aa0.2□□□□□ -2.38
PSPC1-208ENST00000635562 MT2AP02795 61 aa0.19□□□□□ -2.38
PSPC1-208ENST00000635562 MT1MQ8N339 61 aa0.19□□□□□ -2.38
PSPC1-208ENST00000635562 KRTAP19-2Q3LHN2 52 aa0.18□□□□□ -2.38
PSPC1-208ENST00000635562 MT1BP07438 61 aa0.16□□□□□ -2.38
PSPC1-208ENST00000635562 FSIP2Q5CZC0 6907 aa0.15□□□□□ -2.38
PSPC1-208ENST00000635562 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
PSPC1-208ENST00000635562 MT1HL1P0DM35 61 aa0.13□□□□□ -2.39
PSPC1-208ENST00000635562 RNF213Q63HN8 5207 aa0.11□□□□□ -2.39
PSPC1-208ENST00000635562 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
PSPC1-208ENST00000635562 EPPK1P58107 5090 aaKnown RBP0.08□□□□□ -2.4
PSPC1-208ENST00000635562 MT1FP04733 61 aa0.07□□□□□ -2.4
PSPC1-208ENST00000635562 KIAA1109Q2LD37 5005 aa0.06□□□□□ -2.4
PSPC1-208ENST00000635562 MACF1Q9UPN3 7388 aaKnown RBP0.05□□□□□ -2.4
PSPC1-208ENST00000635562 RYR2Q92736 4967 aa0.03□□□□□ -2.4
PSPC1-208ENST00000635562 MT4P47944 62 aa0.01□□□□□ -2.41
PSPC1-208ENST00000635562 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
PSPC1-208ENST00000635562 ABCA13Q86UQ4 5058 aa-0.02□□□□□ -2.41
PSPC1-208ENST00000635562 DSTQ03001 7570 aaKnown RBP-0.11□□□□□ -2.43
PSPC1-208ENST00000635562 KRTAP19-6Q3LI70 58 aa-0.24□□□□□ -2.45
PSPC1-208ENST00000635562 KRTAP20-1Q3LI63 56 aa-0.28□□□□□ -2.45
PSPC1-208ENST00000635562 NEBP20929 6669 aa-0.32□□□□□ -2.46
Retrieved 78 of 20,778 RNA–protein pairs in 802.4 ms