RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 A0A1B0GU33 70 aa6.95□□□□□ -1.3
TARDBP-228ENST00000629725 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
TARDBP-228ENST00000629725 KRTAP12-1P59990 96 aa6.92□□□□□ -1.3
TARDBP-228ENST00000629725 TMEM258P61165 79 aa6.91□□□□□ -1.3
TARDBP-228ENST00000629725 KRTAP20-2Q3LI61 65 aa6.87□□□□□ -1.31
TARDBP-228ENST00000629725 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
TARDBP-228ENST00000629725 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
TARDBP-228ENST00000629725 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
TARDBP-228ENST00000629725 A0A1B0GU69 56 aa6.72□□□□□ -1.33
TARDBP-228ENST00000629725 A8MU10 97 aa6.72□□□□□ -1.33
TARDBP-228ENST00000629725 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
TARDBP-228ENST00000629725 PCP4P48539 62 aa6.68□□□□□ -1.34
TARDBP-228ENST00000629725 KRTAP12-4P60329 112 aa6.67□□□□□ -1.34
TARDBP-228ENST00000629725 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
TARDBP-228ENST00000629725 TNP1P09430 55 aa6.66□□□□□ -1.34
TARDBP-228ENST00000629725 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
TARDBP-228ENST00000629725 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
TARDBP-228ENST00000629725 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
TARDBP-228ENST00000629725 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
TARDBP-228ENST00000629725 V9GYY9 64 aa6.48□□□□□ -1.37
TARDBP-228ENST00000629725 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
TARDBP-228ENST00000629725 Q1T7F1 81 aa6.45□□□□□ -1.38
TARDBP-228ENST00000629725 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
TARDBP-228ENST00000629725 UQCR11O14957 56 aa6.39□□□□□ -1.39
TARDBP-228ENST00000629725 PSPHP1O15172 72 aa6.3□□□□□ -1.4
TARDBP-228ENST00000629725 MUC5ACP98088 5654 aa6.27□□□□□ -1.41
TARDBP-228ENST00000629725 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
TARDBP-228ENST00000629725 MUC5BQ9HC84 5762 aaPredicted RBP6.24□□□□□ -1.41
TARDBP-228ENST00000629725 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
TARDBP-228ENST00000629725 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
TARDBP-228ENST00000629725 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
TARDBP-228ENST00000629725 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
TARDBP-228ENST00000629725 A6NED7 52 aa6.13□□□□□ -1.43
TARDBP-228ENST00000629725 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
TARDBP-228ENST00000629725 K7ERS5 55 aa6.08□□□□□ -1.44
TARDBP-228ENST00000629725 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
TARDBP-228ENST00000629725 H3BS24 57 aa6.05□□□□□ -1.44
TARDBP-228ENST00000629725 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
TARDBP-228ENST00000629725 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
TARDBP-228ENST00000629725 MT1AP04731 61 aa6.01□□□□□ -1.45
TARDBP-228ENST00000629725 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
TARDBP-228ENST00000629725 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
TARDBP-228ENST00000629725 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
TARDBP-228ENST00000629725 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
TARDBP-228ENST00000629725 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
TARDBP-228ENST00000629725 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
TARDBP-228ENST00000629725 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
TARDBP-228ENST00000629725 ROMO1P60602 79 aa5.74□□□□□ -1.49
TARDBP-228ENST00000629725 KRTAP5-1Q6L8H4 278 aa5.7□□□□□ -1.5
TARDBP-228ENST00000629725 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
TARDBP-228ENST00000629725 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
TARDBP-228ENST00000629725 MT3P25713 68 aa5.54□□□□□ -1.52
TARDBP-228ENST00000629725 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
TARDBP-228ENST00000629725 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
TARDBP-228ENST00000629725 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
TARDBP-228ENST00000629725 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
TARDBP-228ENST00000629725 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
TARDBP-228ENST00000629725 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
TARDBP-228ENST00000629725 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
TARDBP-228ENST00000629725 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
TARDBP-228ENST00000629725 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
TARDBP-228ENST00000629725 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
TARDBP-228ENST00000629725 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
TARDBP-228ENST00000629725 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
TARDBP-228ENST00000629725 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
TARDBP-228ENST00000629725 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
TARDBP-228ENST00000629725 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
TARDBP-228ENST00000629725 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
TARDBP-228ENST00000629725 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
TARDBP-228ENST00000629725 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
TARDBP-228ENST00000629725 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
TARDBP-228ENST00000629725 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
TARDBP-228ENST00000629725 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
TARDBP-228ENST00000629725 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
TARDBP-228ENST00000629725 INE1O15225 51 aa3.11□□□□□ -1.91
TARDBP-228ENST00000629725 PRM1P04553 51 aa2.93□□□□□ -1.94
TARDBP-228ENST00000629725 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 104 ms