RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 LRP2P98164 4655 aa1.89□□□□□ -2.11
CDKL5-205ENST00000623535 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
CDKL5-205ENST00000623535 RYR3Q15413 4870 aa1.86□□□□□ -2.11
CDKL5-205ENST00000623535 KMT2CQ8NEZ4 4911 aaKnown RBP1.86□□□□□ -2.11
CDKL5-205ENST00000623535 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.85□□□□□ -2.11
CDKL5-205ENST00000623535 HYDINQ4G0P3 5121 aa1.84□□□□□ -2.11
CDKL5-205ENST00000623535 HSPG2P98160 4391 aa1.84□□□□□ -2.11
CDKL5-205ENST00000623535 HERC2O95714 4834 aa1.83□□□□□ -2.12
CDKL5-205ENST00000623535 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
CDKL5-205ENST00000623535 PRM1P04553 51 aa1.83□□□□□ -2.12
CDKL5-205ENST00000623535 MT1AP04731 61 aa1.83□□□□□ -2.12
CDKL5-205ENST00000623535 LRP1BQ9NZR2 4599 aa1.83□□□□□ -2.12
CDKL5-205ENST00000623535 FAT1Q14517 4588 aa1.82□□□□□ -2.12
CDKL5-205ENST00000623535 HERC1Q15751 4861 aa1.8□□□□□ -2.12
CDKL5-205ENST00000623535 ABCA13Q86UQ4 5058 aa1.8□□□□□ -2.12
CDKL5-205ENST00000623535 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
CDKL5-205ENST00000623535 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
CDKL5-205ENST00000623535 KIAA1109Q2LD37 5005 aa1.79□□□□□ -2.12
CDKL5-205ENST00000623535 KRTAP4-9Q9BYQ8 210 aa1.77□□□□□ -2.13
CDKL5-205ENST00000623535 EPPK1P58107 5090 aaKnown RBP1.77□□□□□ -2.13
CDKL5-205ENST00000623535 LCE2AQ5TA79 106 aaPredicted RBP1.76□□□□□ -2.13
CDKL5-205ENST00000623535 KRTAP4-7Q9BYR0 210 aa1.73□□□□□ -2.13
CDKL5-205ENST00000623535 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
CDKL5-205ENST00000623535 STARD9Q9P2P6 4700 aa1.71□□□□□ -2.14
CDKL5-205ENST00000623535 LOC100996750A0A140TA64 210 aa1.69□□□□□ -2.14
CDKL5-205ENST00000623535 KRTAP9-4Q9BYQ2 154 aa1.68□□□□□ -2.14
CDKL5-205ENST00000623535 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
CDKL5-205ENST00000623535 HMCN2Q8NDA2 5059 aa1.66□□□□□ -2.14
CDKL5-205ENST00000623535 USH2AO75445 5202 aa1.65□□□□□ -2.14
CDKL5-205ENST00000623535 TNXBP22105 4242 aa1.64□□□□□ -2.15
CDKL5-205ENST00000623535 FAT4Q6V0I7 4981 aa1.63□□□□□ -2.15
CDKL5-205ENST00000623535 KRTAP4-3Q9BYR4 195 aa1.6□□□□□ -2.15
CDKL5-205ENST00000623535 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
CDKL5-205ENST00000623535 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.16
CDKL5-205ENST00000623535 NEBP20929 6669 aa1.56□□□□□ -2.16
CDKL5-205ENST00000623535 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
CDKL5-205ENST00000623535 MUC17Q685J3 4493 aa1.52□□□□□ -2.17
CDKL5-205ENST00000623535 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
CDKL5-205ENST00000623535 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
CDKL5-205ENST00000623535 MUC2Q02817 5179 aa1.5□□□□□ -2.17
CDKL5-205ENST00000623535 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
CDKL5-205ENST00000623535 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
CDKL5-205ENST00000623535 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
CDKL5-205ENST00000623535 LPAP08519 4548 aa1.44□□□□□ -2.18
CDKL5-205ENST00000623535 MDN1Q9NU22 5596 aa1.44□□□□□ -2.18
CDKL5-205ENST00000623535 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
CDKL5-205ENST00000623535 KRTAP5-9P26371 169 aa1.39□□□□□ -2.19
CDKL5-205ENST00000623535 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
CDKL5-205ENST00000623535 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
CDKL5-205ENST00000623535 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
CDKL5-205ENST00000623535 KRTAP4-11Q9BYQ6 195 aa1.36□□□□□ -2.19
CDKL5-205ENST00000623535 KRTAP4-2Q9BYR5 136 aa1.34□□□□□ -2.19
CDKL5-205ENST00000623535 OBSCNQ5VST9 7968 aa1.34□□□□□ -2.2
CDKL5-205ENST00000623535 KMT2DO14686 5537 aa1.33□□□□□ -2.2
CDKL5-205ENST00000623535 KRTAP4-6Q9BYQ5 205 aa1.32□□□□□ -2.2
CDKL5-205ENST00000623535 KRTAP4-12Q9BQ66 201 aa1.31□□□□□ -2.2
CDKL5-205ENST00000623535 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CDKL5-205ENST00000623535 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
CDKL5-205ENST00000623535 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
CDKL5-205ENST00000623535 KRTAP9-6A8MVA2 160 aa1.24□□□□□ -2.21
CDKL5-205ENST00000623535 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
CDKL5-205ENST00000623535 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
CDKL5-205ENST00000623535 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
CDKL5-205ENST00000623535 KRTAP5-3Q6L8H2 238 aa1.2□□□□□ -2.22
CDKL5-205ENST00000623535 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
CDKL5-205ENST00000623535 MUC19Q7Z5P9 8384 aa1.07□□□□□ -2.24
CDKL5-205ENST00000623535 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
CDKL5-205ENST00000623535 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
CDKL5-205ENST00000623535 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
CDKL5-205ENST00000623535 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
CDKL5-205ENST00000623535 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
CDKL5-205ENST00000623535 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
CDKL5-205ENST00000623535 KRTAP5-2Q701N4 177 aa0.78□□□□□ -2.29
CDKL5-205ENST00000623535 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
CDKL5-205ENST00000623535 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
CDKL5-205ENST00000623535 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.71□□□□□ -2.3
CDKL5-205ENST00000623535 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 174.8 ms