RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 DCAF8L2P0C7V8 631 aa10.8□□□□□ -0.68
CDKL5-205ENST00000623535 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
CDKL5-205ENST00000623535 PELP1Q8IZL8 1130 aaKnown RBP10.05□□□□□ -0.8
CDKL5-205ENST00000623535 APLP2Q06481 763 aa10□□□□□ -0.81
CDKL5-205ENST00000623535 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.86
CDKL5-205ENST00000623535 CCER1Q8TC90 406 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-205ENST00000623535 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
CDKL5-205ENST00000623535 NISCHQ9Y2I1 1504 aa9.54□□□□□ -0.88
CDKL5-205ENST00000623535 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
CDKL5-205ENST00000623535 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
CDKL5-205ENST00000623535 EHMT2Q96KQ7 1210 aa9.4□□□□□ -0.9
CDKL5-205ENST00000623535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
CDKL5-205ENST00000623535 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
CDKL5-205ENST00000623535 CHIC1Q5VXU3 224 aa9.32□□□□□ -0.92
CDKL5-205ENST00000623535 SLC4A1APQ9BWU0 796 aaKnown RBP9.28□□□□□ -0.92
CDKL5-205ENST00000623535 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
CDKL5-205ENST00000623535 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-205ENST00000623535 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
CDKL5-205ENST00000623535 TTBK1Q5TCY1 1321 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-205ENST00000623535 NEFLP07196 543 aa9.21□□□□□ -0.93
CDKL5-205ENST00000623535 YTHDC1Q96MU7 727 aaKnown RBP9.2□□□□□ -0.94
CDKL5-205ENST00000623535 SHROOM4Q9ULL8 1493 aa9.18□□□□□ -0.94
CDKL5-205ENST00000623535 BCANQ96GW7 911 aa9.18□□□□□ -0.94
CDKL5-205ENST00000623535 NEFMP07197 916 aa9.17□□□□□ -0.94
CDKL5-205ENST00000623535 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
CDKL5-205ENST00000623535 ZBTB47Q9UFB7 747 aaPredicted RBP9.14□□□□□ -0.95
CDKL5-205ENST00000623535 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
CDKL5-205ENST00000623535 POLR3GLQ9BT43 218 aa9.05□□□□□ -0.96
CDKL5-205ENST00000623535 CENPBP07199 599 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-205ENST00000623535 NPM1P06748 294 aaKnown RBP eCLIP8.99□□□□□ -0.97
CDKL5-205ENST00000623535 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
CDKL5-205ENST00000623535 CLSPNQ9HAW4 1339 aa8.97□□□□□ -0.97
CDKL5-205ENST00000623535 TRIM41Q8WV44 630 aa8.97□□□□□ -0.97
CDKL5-205ENST00000623535 STAG3Q9UJ98 1225 aa8.94□□□□□ -0.98
CDKL5-205ENST00000623535 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-205ENST00000623535 CDK11BP21127 795 aaKnown RBP8.93□□□□□ -0.98
CDKL5-205ENST00000623535 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-205ENST00000623535 FBLN2P98095 1184 aa8.92□□□□□ -0.98
CDKL5-205ENST00000623535 PCGF6Q9BYE7 350 aa8.89□□□□□ -0.99
CDKL5-205ENST00000623535 ZEB1P37275 1124 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-205ENST00000623535 A0A0G2JS52 829 aa8.87□□□□□ -0.99
CDKL5-205ENST00000623535 SCAF1Q9H7N4 1312 aaKnown RBP8.86□□□□□ -0.99
CDKL5-205ENST00000623535 PLPPR3Q6T4P5 718 aa8.86□□□□□ -0.99
CDKL5-205ENST00000623535 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
CDKL5-205ENST00000623535 DCAF8L1A6NGE4 600 aa8.81□□□□□ -1
CDKL5-205ENST00000623535 C14orf37Q86TY3 774 aa8.77□□□□□ -1.01
CDKL5-205ENST00000623535 ITGAEP38570 1179 aa8.77□□□□□ -1.01
CDKL5-205ENST00000623535 CANXP27824 592 aaKnown RBP8.76□□□□□ -1.01
CDKL5-205ENST00000623535 NPHP1O15259 732 aa8.75□□□□□ -1.01
CDKL5-205ENST00000623535 AEBP2Q6ZN18 517 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-205ENST00000623535 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
CDKL5-205ENST00000623535 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
CDKL5-205ENST00000623535 FOXD1Q16676 465 aa8.71□□□□□ -1.01
CDKL5-205ENST00000623535 CNGB1Q14028 1251 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-205ENST00000623535 MYT1Q01538 1121 aa8.69□□□□□ -1.02
CDKL5-205ENST00000623535 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-205ENST00000623535 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.03
CDKL5-205ENST00000623535 TRHP20396 242 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-205ENST00000623535 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
CDKL5-205ENST00000623535 BCL11AQ9H165 835 aa8.62□□□□□ -1.03
CDKL5-205ENST00000623535 TMX4Q9H1E5 349 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-205ENST00000623535 FAM50AQ14320 339 aaKnown RBP8.61□□□□□ -1.03
CDKL5-205ENST00000623535 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-205ENST00000623535 ANP32BQ92688 251 aaKnown RBP8.6□□□□□ -1.03
CDKL5-205ENST00000623535 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
CDKL5-205ENST00000623535 EIF4G2P78344 907 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDKL5-205ENST00000623535 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
CDKL5-205ENST00000623535 HSP90AA1P07900 732 aaKnown RBP8.54□□□□□ -1.04
CDKL5-205ENST00000623535 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
CDKL5-205ENST00000623535 ARXQ96QS3 562 aa8.52□□□□□ -1.05
CDKL5-205ENST00000623535 ZNF777Q9ULD5 760 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-205ENST00000623535 CHMP7Q8WUX9 453 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-205ENST00000623535 MYH16Q9H6N6 1097 aa8.49□□□□□ -1.05
CDKL5-205ENST00000623535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKL5-205ENST00000623535 NCBP3Q53F19 620 aaKnown RBP8.47□□□□□ -1.05
CDKL5-205ENST00000623535 UPF2Q9HAU5 1272 aaKnown RBP8.47□□□□□ -1.05
CDKL5-205ENST00000623535 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-205ENST00000623535 PABPN1Q86U42 306 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDKL5-205ENST00000623535 FKBP8Q14318 412 aa8.46□□□□□ -1.06
CDKL5-205ENST00000623535 ABCC9O60706 1549 aa8.45□□□□□ -1.06
CDKL5-205ENST00000623535 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
CDKL5-205ENST00000623535 ANP32EQ9BTT0 268 aa8.45□□□□□ -1.06
CDKL5-205ENST00000623535 CLSTN1O94985 981 aa8.44□□□□□ -1.06
CDKL5-205ENST00000623535 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
CDKL5-205ENST00000623535 PLEKHG5O94827 1062 aa8.42□□□□□ -1.06
CDKL5-205ENST00000623535 ZRSR1Q15695 479 aaKnown RBP8.42□□□□□ -1.06
CDKL5-205ENST00000623535 LMOD2Q6P5Q4 547 aa8.41□□□□□ -1.06
CDKL5-205ENST00000623535 PHF23Q9BUL5 403 aaPredicted RBP8.41□□□□□ -1.06
CDKL5-205ENST00000623535 EIF5BO60841 1220 aaKnown RBP8.39□□□□□ -1.07
CDKL5-205ENST00000623535 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-205ENST00000623535 ANP32CO43423 234 aa8.39□□□□□ -1.07
CDKL5-205ENST00000623535 G3V3G9 751 aa8.37□□□□□ -1.07
CDKL5-205ENST00000623535 DCAF8Q5TAQ9 597 aa8.37□□□□□ -1.07
CDKL5-205ENST00000623535 TSPY4P0CV99 314 aa8.37□□□□□ -1.07
CDKL5-205ENST00000623535 TSPY10P0CW01 314 aa8.37□□□□□ -1.07
CDKL5-205ENST00000623535 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.36□□□□□ -1.07
CDKL5-205ENST00000623535 ARID3CA6NKF2 412 aa8.35□□□□□ -1.07
CDKL5-205ENST00000623535 NEUROD1Q13562 356 aa8.35□□□□□ -1.07
CDKL5-205ENST00000623535 ISY1Q9ULR0 285 aaKnown RBP8.34□□□□□ -1.07
CDKL5-205ENST00000623535 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms