RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
TARDBP-225ENST00000621715 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
TARDBP-225ENST00000621715 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
TARDBP-225ENST00000621715 SEC61GP60059 68 aa5.52□□□□□ -1.53
TARDBP-225ENST00000621715 A8MU10 97 aa5.49□□□□□ -1.53
TARDBP-225ENST00000621715 TNP1P09430 55 aa5.47□□□□□ -1.53
TARDBP-225ENST00000621715 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
TARDBP-225ENST00000621715 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
TARDBP-225ENST00000621715 SERP2Q8N6R1 65 aa5.43□□□□□ -1.54
TARDBP-225ENST00000621715 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
TARDBP-225ENST00000621715 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
TARDBP-225ENST00000621715 SMIM26A0A096LP01 95 aa5.35□□□□□ -1.55
TARDBP-225ENST00000621715 COX7CP15954 63 aa5.31□□□□□ -1.56
TARDBP-225ENST00000621715 A0A1B0GU69 56 aa5.26□□□□□ -1.57
TARDBP-225ENST00000621715 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
TARDBP-225ENST00000621715 ANAPC13Q9BS18 74 aa5.21□□□□□ -1.58
TARDBP-225ENST00000621715 H7BZZ5 65 aa5.2□□□□□ -1.58
TARDBP-225ENST00000621715 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
TARDBP-225ENST00000621715 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
TARDBP-225ENST00000621715 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
TARDBP-225ENST00000621715 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
TARDBP-225ENST00000621715 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
TARDBP-225ENST00000621715 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
TARDBP-225ENST00000621715 CCDC179H3BU77 68 aa5.07□□□□□ -1.6
TARDBP-225ENST00000621715 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
TARDBP-225ENST00000621715 ATP5EP56381 51 aaPredicted RBP5.03□□□□□ -1.6
TARDBP-225ENST00000621715 MT1AP04731 61 aa5.01□□□□□ -1.61
TARDBP-225ENST00000621715 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
TARDBP-225ENST00000621715 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
TARDBP-225ENST00000621715 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
TARDBP-225ENST00000621715 TMEM258P61165 79 aa4.95□□□□□ -1.62
TARDBP-225ENST00000621715 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
TARDBP-225ENST00000621715 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
TARDBP-225ENST00000621715 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
TARDBP-225ENST00000621715 PRR15LQ9BU68 103 aa4.89□□□□□ -1.63
TARDBP-225ENST00000621715 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
TARDBP-225ENST00000621715 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
TARDBP-225ENST00000621715 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
TARDBP-225ENST00000621715 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
TARDBP-225ENST00000621715 PCP4P48539 62 aa4.79□□□□□ -1.64
TARDBP-225ENST00000621715 UQCR11O14957 56 aa4.77□□□□□ -1.65
TARDBP-225ENST00000621715 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
TARDBP-225ENST00000621715 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
TARDBP-225ENST00000621715 V9GYY9 64 aa4.68□□□□□ -1.66
TARDBP-225ENST00000621715 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
TARDBP-225ENST00000621715 Q1T7F1 81 aa4.63□□□□□ -1.67
TARDBP-225ENST00000621715 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
TARDBP-225ENST00000621715 MT3P25713 68 aa4.55□□□□□ -1.68
TARDBP-225ENST00000621715 PSPHP1O15172 72 aa4.54□□□□□ -1.68
TARDBP-225ENST00000621715 K7ERS5 55 aa4.52□□□□□ -1.69
TARDBP-225ENST00000621715 A6NED7 52 aa4.42□□□□□ -1.7
TARDBP-225ENST00000621715 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
TARDBP-225ENST00000621715 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
TARDBP-225ENST00000621715 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
TARDBP-225ENST00000621715 ROMO1P60602 79 aa4.25□□□□□ -1.73
TARDBP-225ENST00000621715 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
TARDBP-225ENST00000621715 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
TARDBP-225ENST00000621715 BRK1Q8WUW1 75 aa4□□□□□ -1.77
TARDBP-225ENST00000621715 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
TARDBP-225ENST00000621715 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
TARDBP-225ENST00000621715 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
TARDBP-225ENST00000621715 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
TARDBP-225ENST00000621715 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
TARDBP-225ENST00000621715 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TARDBP-225ENST00000621715 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
TARDBP-225ENST00000621715 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
TARDBP-225ENST00000621715 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
TARDBP-225ENST00000621715 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
TARDBP-225ENST00000621715 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
TARDBP-225ENST00000621715 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
TARDBP-225ENST00000621715 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
TARDBP-225ENST00000621715 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
TARDBP-225ENST00000621715 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
TARDBP-225ENST00000621715 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
TARDBP-225ENST00000621715 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
TARDBP-225ENST00000621715 INE1O15225 51 aa2.46□□□□□ -2.02
TARDBP-225ENST00000621715 PRM1P04553 51 aa2.2□□□□□ -2.06
TARDBP-225ENST00000621715 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 796.1 ms